Analysis of plant pan-genomes and transcriptomes with GET_HOMOLOGUES-EST, a clustering solution for sequences of the same species
The pan-genome of a species is defined as the union of all the genes and non-coding
sequences found in all its individuals. However, constructing a pan-genome for plants with …
sequences found in all its individuals. However, constructing a pan-genome for plants with …
Genetic Differences in Barley Govern the Responsiveness to N-Acyl Homoserine Lactone
A Shrestha, A Elhady, S Adss, G Wehner… - Phytobiomes …, 2019 - Am Phytopath Society
Enhanced resistance in barley (Hordeum vulgare) against pathogens, such as the powdery
mildew-causing fungus Blumeria graminis f. sp. hordei, is of high importance. The beneficial …
mildew-causing fungus Blumeria graminis f. sp. hordei, is of high importance. The beneficial …
Extensive allele mining discovers novel genetic diversity in the loci controlling frost tolerance in barley
Key message Exome sequencing-based allele mining for frost tolerance suggests HvCBF14
rather than CNV at Fr-H2 locus is the main responsible of frost tolerance in barley. Abstract …
rather than CNV at Fr-H2 locus is the main responsible of frost tolerance in barley. Abstract …
High resolution genetic and physical map** of a major powdery mildew resistance locus in barley
P Hoseinzadeh, R Zhou, M Mascher… - Frontiers in plant …, 2019 - frontiersin.org
Powdery mildew caused by Blumeria graminis f. sp. hordei is a foliar disease with highly
negative impact on yield and grain quality in barley. Thus, breeding for powdery mildew …
negative impact on yield and grain quality in barley. Thus, breeding for powdery mildew …
Differential expression of NBS-LRR-encoding genes in the root transcriptomes of two Solanum phureja genotypes with contrasting resistance to Globodera …
Background The characterization of major resistance genes (R genes) in the potato remains
an important task for molecular breeding. However, R genes are rapidly evolving and …
an important task for molecular breeding. However, R genes are rapidly evolving and …
Comparative Subsequence Sets Analysis (CoSSA) is a robust approach to identify haplotype specific SNPs; map** and pedigree analysis of a potato wart disease …
Background Standard strategies to identify genomic regions involved in a specific trait
variation are often limited by time and resource consuming genoty** methods. Other …
variation are often limited by time and resource consuming genoty** methods. Other …
Genetic control of root/shoot biomass partitioning in barley seedlings
The process of allocating resources to different plant organs in the early stage of
development can affect their adaptation to drought conditions, by influencing water uptake …
development can affect their adaptation to drought conditions, by influencing water uptake …
Resequencing theVrs1 gene in Spanish barley landraces revealed reversion of six-rowed to two-rowed spike
Abstract Six-rowed spike 1 (Vrs1) is a gene of major importance for barley breeding and
germplasm management as it is the main gene determining spike row-type (2-rowed vs. 6 …
germplasm management as it is the main gene determining spike row-type (2-rowed vs. 6 …
Genome-wide association study of stem rust resistance in a world collection of cultivated barley
Key message QTL conferring a 14–40% reduction in adult plant stem rust severity to multiple
races of Pgt were found on chromosome 5H and will be useful in barley breeding. Abstract …
races of Pgt were found on chromosome 5H and will be useful in barley breeding. Abstract …
NLR genes related transcript sets in potato cultivars bearing genetic material of wild Mexican solanum species
The long history of potato breeding includes the numerous introgressions of resistance
genes from many wild species of South and Central America as well as from cultivated …
genes from many wild species of South and Central America as well as from cultivated …