Response of Terahertz Protein Vibrations to Ligand Binding: Calmodulin–Peptide Complexes as a Case Study

B Varvdekar, A Prabhakant… - Journal of chemical …, 2022 - ACS Publications
Terahertz vibrations are sensitive reporters of the structure and interactions of proteins.
Ligand binding alters the nature and distribution of these collective vibrations. The ligand …

[HTML][HTML] Investigations on Na+, K+-ATPase energy consumption in ion flow of hydrophilic pores by THz unipolar stimulation

W Bo, R Che, Q Liu, X Zhang, Y Hou, Y Gong - Iscience, 2023 - cell.com
Terahertz science and technology has recently shown new application prospects in artificial
intelligence. It is found that terahertz unipolar stimulation can activate cell membrane …

Protein fluctuations in response to random external forces

D Scaramozzino, PM Khade, RL Jernigan - Applied Sciences, 2022 - mdpi.com
Elastic network models (ENMs) have been widely used in the last decades to investigate
protein motions and dynamics. There the intrinsic fluctuations based on the isolated …

Agentic End-to-End De Novo Protein Design for Tailored Dynamics Using a Language Diffusion Model

B Ni, MJ Buehler - arxiv preprint arxiv:2502.10173, 2025 - arxiv.org
Proteins are dynamic molecular machines whose biological functions, spanning enzymatic
catalysis, signal transduction, and structural adaptation, are intrinsically linked to their …

Toward establishing molecular interfaces using Terahertz radiation

H Elayan, A Eckford, R Adve - 2022 IEEE 16th International …, 2022 - ieeexplore.ieee.org
Miniaturization is creating innovative solutions that pave the path toward effective diagnosis
and treatments. One option is molecular communication (MC), where information is …

Dynamically driven correlations in elastic net models reveal sequence of events and causality in proteins

A Erkip, B Erman - Proteins: Structure, Function, and …, 2024 - Wiley Online Library
An explicit analytic solution is given for the Langevin equation applied to the Gaussian
Network Model of a protein subjected to both a random and a deterministic periodic force …

Controlling Molecular Interactions Using Terahertz Electromagnetic Waves

HWM Mohammad - 2023 - search.proquest.com
In this thesis, we propose a stimulus-responsive paradigm which integrates electromagnetic
(EM) and molecular communication (MC) by stimulating proteins in the human body. Our …

Non-contact Millimeter Wave Dielectric Spectroscopy on Aqueous Solution

CM Wu, CC Cheng, SH Yang - 2023 48th International …, 2023 - ieeexplore.ieee.org
Inter-molecule and intra-molecule interaction in aqueous solution has important role on
functionality of biomolecules such as proteins. These interactions can be probe with …