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The role of conformational dynamics and allostery in modulating protein evolution
Advances in sequencing techniques and statistical methods have made it possible not only
to predict sequences of ancestral proteins but also to identify thousands of mutations in the …
to predict sequences of ancestral proteins but also to identify thousands of mutations in the …
Earth BioGenome Project: Sequencing life for the future of life
Increasing our understanding of Earth's biodiversity and responsibly stewarding its
resources are among the most crucial scientific and social challenges of the new …
resources are among the most crucial scientific and social challenges of the new …
Phylogenomics and the genetic architecture of the placental mammal radiation
The genomes of placental mammals are being sequenced at an unprecedented rate.
Alignments of hundreds, and one day thousands, of genomes spanning the rich living and …
Alignments of hundreds, and one day thousands, of genomes spanning the rich living and …
Whole-genome sequencing of the snub-nosed monkey provides insights into folivory and evolutionary history
Colobines are a unique group of Old World monkeys that principally eat leaves and seeds
rather than fruits and insects. We report the sequencing at 146× coverage, de novo …
rather than fruits and insects. We report the sequencing at 146× coverage, de novo …
Next generation exome sequencing of paediatric inflammatory bowel disease patients identifies rare and novel variants in candidate genes
Background Multiple genes have been implicated by association studies in altering
inflammatory bowel disease (IBD) predisposition. Paediatric patients often manifest more …
inflammatory bowel disease (IBD) predisposition. Paediatric patients often manifest more …
Evolutionary informatics: unifying knowledge about the diversity of life
CS Parr, R Guralnick, N Cellinese… - Trends in ecology & …, 2012 - cell.com
The accelerating growth of data and knowledge in evolutionary biology is indisputable.
Despite this rapid progress, information remains scattered, poorly documented and in …
Despite this rapid progress, information remains scattered, poorly documented and in …
DFNB16 is a frequent cause of congenital hearing impairment: implementation of STRC mutation analysis in routine diagnostics
B Vona, MAH Hofrichter, C Neuner, J Schröder… - Clinical …, 2015 - Wiley Online Library
Increasing attention has been directed toward assessing mutational fallout of stereocilin
(STRC), the gene underlying DFNB16. A major challenge is due to a closely linked …
(STRC), the gene underlying DFNB16. A major challenge is due to a closely linked …
Structural dynamics flexibility informs function and evolution at a proteome scale
Protein structures are dynamic entities with a myriad of atomic fluctuations, side chain
rotations, and collective domain movements. While the importance of these dynamics to …
rotations, and collective domain movements. While the importance of these dynamics to …
Dynamic coupling of residues within proteins as a mechanistic foundation of many enigmatic pathogenic missense variants
Many pathogenic missense mutations are found in protein positions that are neither well-
conserved nor fall in any known functional domains. Consequently, we lack any mechanistic …
conserved nor fall in any known functional domains. Consequently, we lack any mechanistic …
A gene gravity model for the evolution of cancer genomes: a study of 3,000 cancer genomes across 9 cancer types
Cancer development and progression result from somatic evolution by an accumulation of
genomic alterations. The effects of those alterations on the fitness of somatic cells lead to …
genomic alterations. The effects of those alterations on the fitness of somatic cells lead to …