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Conservation of biodiversity in the genomics era
MA Supple, B Shapiro - Genome biology, 2018 - Springer
Abstract “Conservation genomics” encompasses the idea that genome-scale data will
improve the capacity of resource managers to protect species. Although genetic approaches …
improve the capacity of resource managers to protect species. Although genetic approaches …
A guide to carrying out a phylogenomic target sequence capture project
High-throughput DNA sequencing techniques enable time-and cost-effective sequencing of
large portions of the genome. Instead of sequencing and annotating whole genomes, many …
large portions of the genome. Instead of sequencing and annotating whole genomes, many …
A beginner's guide to low‐coverage whole genome sequencing for population genomics
Low‐coverage whole genome sequencing (lcWGS) has emerged as a powerful and cost‐
effective approach for population genomic studies in both model and nonmodel species …
effective approach for population genomic studies in both model and nonmodel species …
[PDF][PDF] Phylogenomics reveals ancient gene tree discordance in the amphibian tree of life
Molecular phylogenies have yielded strong support for many parts of the amphibian Tree of
Life, but poor support for the resolution of deeper nodes, including relationships among …
Life, but poor support for the resolution of deeper nodes, including relationships among …
A chromosome-scale assembly of the axolotl genome
JJ Smith, N Timoshevskaya, VA Timoshevskiy… - Genome …, 2019 - genome.cshlp.org
The axolotl (Ambystoma mexicanum) provides critical models for studying regeneration,
evolution, and development. However, its large genome (∼ 32 Gb) presents a formidable …
evolution, and development. However, its large genome (∼ 32 Gb) presents a formidable …
Population genomics: advancing understanding of nature
Population genomics is advancing our understanding of evolution, ecology, conservation,
agriculture, forestry, and human health by allowing new and long-standing questions to be …
agriculture, forestry, and human health by allowing new and long-standing questions to be …
[HTML][HTML] Phylogenomics of the adaptive radiation of Triturus newts supports gradual ecological niche expansion towards an incrementally aquatic lifestyle
Newts of the genus Triturus (marbled and crested newts) exhibit substantial variation in the
number of trunk vertebrae (NTV) and a higher NTV corresponds to a longer annual aquatic …
number of trunk vertebrae (NTV) and a higher NTV corresponds to a longer annual aquatic …
Population genomics provides key insights in ecology and evolution
Population genomic tools have revolutionized many aspects of biology, as detailed
throughout the chapters of this volume. In particular, population genomics has provided key …
throughout the chapters of this volume. In particular, population genomics has provided key …
[HTML][HTML] Anchored hybrid enrichment generated nuclear, plastid and mitochondrial markers resolve the Lepanthes horrida (Orchidaceae: Pleurothallidinae) species …
Phylogenetic relationships in species complexes and lineages derived from rapid
diversifications are often challenging to resolve using morphology or standard DNA …
diversifications are often challenging to resolve using morphology or standard DNA …
Spatial genetic structure in European marbled newts revealed with target enrichment by sequence capture
European marbled newts come in two species that have abutting ranges. The northern
species, Triturus marmoratus, is found in France and the northern part of the Iberian …
species, Triturus marmoratus, is found in France and the northern part of the Iberian …