Tractostorm: The what, why, and how of tractography dissection reproducibility

F Rheault, A De Benedictis, A Daducci… - Human brain …, 2020 - Wiley Online Library
Investigative studies of white matter (WM) brain structures using diffusion MRI (dMRI)
tractography frequently require manual WM bundle segmentation, often called “virtual …

Semiclassical “Divide-and-Conquer” method for spectroscopic calculations of high dimensional molecular systems

M Ceotto, G Di Liberto, R Conte - Physical Review Letters, 2017 - APS
A new semiclassical “divide-and-conquer” method is presented with the aim of
demonstrating that quantum dynamics simulations of high dimensional molecular systems …

On-the-fly ab initio semiclassical evaluation of vibronic spectra at finite temperature

T Begušić, J Vaníček - The Journal of Chemical Physics, 2020 - pubs.aip.org
To compute and analyze vibrationally resolved electronic spectra at zero temperature, we
have recently implemented the on-the-fly ab initio extended thawed Gaussian approximation …

On-the-fly ab initio semiclassical calculation of glycine vibrational spectrum

F Gabas, R Conte, M Ceotto - Journal of chemical theory and …, 2017 - ACS Publications
We present an on-the-fly ab initio semiclassical study of vibrational energy levels of glycine,
calculated by Fourier transform of the wavepacket correlation function. It is based on a …

Caldeira–Leggett model vs ab initio potential: A vibrational spectroscopy test of water solvation

A Rognoni, R Conte, M Ceotto - The Journal of Chemical Physics, 2021 - pubs.aip.org
We present a semiclassically approximate quantum treatment of solvation with the purpose
of investigating the accuracy of the Caldeira–Leggett model. We do that by simulating the …

Machine learning for vibrational spectroscopy via divide-and-conquer semiclassical initial value representation molecular dynamics with application to N …

M Gandolfi, A Rognoni, C Aieta, R Conte… - The Journal of Chemical …, 2020 - pubs.aip.org
A machine learning algorithm for partitioning the nuclear vibrational space into subspaces is
introduced. The subdivision criterion is based on Liouville's theorem, ie, the best …

On-the-fly ab initio semiclassical dynamics: Identifying degrees of freedom essential for emission spectra of oligothiophenes

M Wehrle, M Šulc, J Vaníček - The Journal of chemical physics, 2014 - pubs.aip.org
Vibrationally resolved spectra provide a stringent test of the accuracy of theoretical
calculations. We combine the thawed Gaussian approximation (TGA) with an on-the-fly ab …

“Divide and conquer” semiclassical molecular dynamics: A practical method for spectroscopic calculations of high dimensional molecular systems

G Di Liberto, R Conte, M Ceotto - The Journal of Chemical Physics, 2018 - pubs.aip.org
We extensively describe our recently established “divide-and-conquer” semiclassical
method [M. Ceotto, G. Di Liberto, and R. Conte, Phys. Rev. Lett. 119, 010401 (2017)] and …

On-the-fly ab initio semiclassical dynamics of floppy molecules: Absorption and photoelectron spectra of ammonia

M Wehrle, S Oberli, J Vanicek - The Journal of Physical Chemistry …, 2015 - ACS Publications
We investigate the performance of on-the-fly ab initio (OTF-AI) semiclassical dynamics
combined with the thawed Gaussian approximation (TGA) for computing vibrationally …

“Divide-and-conquer” semiclassical molecular dynamics: An application to water clusters

G Di Liberto, R Conte, M Ceotto - The Journal of Chemical Physics, 2018 - pubs.aip.org
We present an investigation of vibrational features in water clusters performed by means of
our recently established divide-and-conquer semiclassical approach [M. Ceotto, G. Di …