Cyanine dye–DNA interactions: intercalation, groove binding, and aggregation
BA Armitage - DNA Binders and Related Subjects: -/-, 2005 - Springer
The cyanine dyes are among the oldest classes of synthetic compounds but continue to find
applications in a variety of fields. In many cases, the dyes act as fluorescent labels for …
applications in a variety of fields. In many cases, the dyes act as fluorescent labels for …
Fluorogenic probes for super-resolution microscopy
E Kozma, P Kele - Organic & biomolecular chemistry, 2019 - pubs.rsc.org
Fluorogenic probes efficiently reduce non-specific background signals, which often results in
highly improved signal-to-noise ratios. Although this implies improved resolution …
highly improved signal-to-noise ratios. Although this implies improved resolution …
Investigations on DNA intercalation and surface binding by SYBR Green I, its structure determination and methodological implications
H Zipper, H Brunner, J Bernhagen… - Nucleic acids …, 2004 - academic.oup.com
The detection of double-stranded (ds) DNA by SYBR Green I (SG) is important in many
molecular biology methods including gel electrophoresis, dsDNA quantification in solution …
molecular biology methods including gel electrophoresis, dsDNA quantification in solution …
Characterization of PicoGreen reagent and development of a fluorescence-based solution assay for double-stranded DNA quantitation
VL Singer, LJ Jones, ST Yue, RP Haugland - Analytical biochemistry, 1997 - Elsevier
A sensitive assay for detecting double-stranded (ds) DNA in solution is described. This
assay employs a new dye, PicoGreen dsDNA quantitation reagent, which becomes …
assay employs a new dye, PicoGreen dsDNA quantitation reagent, which becomes …
The interactions between the fluorescent dye thiazole orange and DNA
J Nygren, N Svanvik, M Kubista - … : Original Research on …, 1998 - Wiley Online Library
The interaction of the fluorescent dye thiazole orange (TO) with nucleic acids is
characterized. It is found that TO binds with highest affinity to double‐stranded (ds) DNA [log …
characterized. It is found that TO binds with highest affinity to double‐stranded (ds) DNA [log …
The impact of DNA intercalators on DNA and DNA-processing enzymes elucidated through force-dependent binding kinetics
AS Biebricher, I Heller, RFH Roijmans… - Nature …, 2015 - nature.com
DNA intercalators are widely used as fluorescent probes to visualize DNA and DNA
transactions in vivo and in vitro. It is well known that they perturb DNA structure and stability …
transactions in vivo and in vitro. It is well known that they perturb DNA structure and stability …
Photophysical Properties of Fluorescent DNA‐dyes Bound to Single‐and Double‐stranded DNA in Aqueous Buffered Solution¶
G Cosa, KS Focsaneanu, JRN McLean… - Photochemistry and …, 2001 - Wiley Online Library
The absorption and fluorescence spectra, fluorescence quantum yields, lifetimes and time‐
resolved fluorescence spectra are reported for nine different fluorescent DNA‐dyes. The …
resolved fluorescence spectra are reported for nine different fluorescent DNA‐dyes. The …
The rheology of dilute solutions of flexible polymers: Progress and problems
RG Larson - Journal of Rheology, 2005 - pubs.aip.org
Recent progress toward understanding the rheology of dilute solutions of flexible polymers
is reviewed, emphasizing experimental results from flows imaging single deoxyribonucleic …
is reviewed, emphasizing experimental results from flows imaging single deoxyribonucleic …
Automated high resolution optical map** using arrayed, fluid-fixed DNA molecules
J **g, J Reed, J Huang, X Hu… - Proceedings of the …, 1998 - National Acad Sciences
New map** approaches construct ordered restriction maps from fluorescence microscope
images of individual, endonuclease-digested DNA molecules. In optical map**, molecules …
images of individual, endonuclease-digested DNA molecules. In optical map**, molecules …
Mechanical and structural properties of YOYO-1 complexed DNA
YOYO-1 is a fluorescent dye widely used for probing the statistical–mechanical properties of
DNA. However, currently contradicting data exist how YOYO-1 binding alters the DNA …
DNA. However, currently contradicting data exist how YOYO-1 binding alters the DNA …