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Discovery of integrons in Archaea: Platforms for cross-domain gene transfer
Horizontal gene transfer between different domains of life is increasingly being recognized
as an important evolutionary driver, with the potential to increase the pace of biochemical …
as an important evolutionary driver, with the potential to increase the pace of biochemical …
Predicting the taxonomic and environmental sources of integron gene cassettes using structural and sequence homology of attC sites
Integrons are bacterial genetic elements that can capture mobile gene cassettes. They are
mostly known for their role in the spread of antibiotic resistance cassettes, contributing …
mostly known for their role in the spread of antibiotic resistance cassettes, contributing …
Methods for the targeted sequencing and analysis of integrons and their gene cassettes from complex microbial communities
Integrons are microbial genetic elements that can integrate mobile gene cassettes. They are
mostly known for spreading antibiotic resistance cassettes among human pathogens …
mostly known for spreading antibiotic resistance cassettes among human pathogens …
The recombination efficiency of the bacterial integron depends on the mechanical stability of the synaptic complex
Multiple antibiotic resistances are a major global health threat. The predominant tool for
adaptation in Gram-negative bacteria is the integron. Under stress, it rearranges gene …
adaptation in Gram-negative bacteria is the integron. Under stress, it rearranges gene …
[HTML][HTML] Functional enrichment of integrons: Facilitators of antimicrobial resistance and niche adaptation
Integrons are genetic elements, found among diverse bacteria and archaea, that capture
and rearrange gene cassettes to rapidly generate genetic diversity and drive adaptation …
and rearrange gene cassettes to rapidly generate genetic diversity and drive adaptation …
Structural and molecular basis for Cardiovirus 2A protein as a viral gene expression switch
Abstract Programmed–1 ribosomal frameshifting (PRF) in cardioviruses is activated by the
2A protein, a multi-functional virulence factor that also inhibits cap-dependent translational …
2A protein, a multi-functional virulence factor that also inhibits cap-dependent translational …
Structure-specific DNA recombination sites: Design, validation, and machine learning–based refinement
Recombination systems are widely used as bioengineering tools, but their sites have to be
highly similar to a consensus sequence or to each other. To develop a recombination …
highly similar to a consensus sequence or to each other. To develop a recombination …
Simultaneous sensing and imaging of individual biomolecular complexes enabled by modular DNA–protein coupling
Many proteins form dynamic complexes with DNA, RNA, and other proteins, which often
involves protein conformational changes that are key to function. Yet, methods to probe …
involves protein conformational changes that are key to function. Yet, methods to probe …
High-yield fabrication of DNA and RNA constructs for single molecule force and torque spectroscopy experiments
FS Papini, M Seifert, D Dulin - Nucleic acids research, 2019 - academic.oup.com
Single molecule biophysics experiments have enabled the observation of biomolecules with
a great deal of precision in space and time, eg nucleic acids mechanical properties and …
a great deal of precision in space and time, eg nucleic acids mechanical properties and …
POTATO: Automated pipeline for batch analysis of optical tweezers data
Optical tweezers are a single-molecule technique that allows probing of intra-and
intermolecular interactions that govern complex biological processes involving molecular …
intermolecular interactions that govern complex biological processes involving molecular …