Metagenomics: An effective approach for exploring microbial diversity and functions

NN Nam, HDK Do, KT Loan Trinh, NY Lee - Foods, 2023 - mdpi.com
Various fields have been identified in the “omics” era, such as genomics, proteomics,
transcriptomics, metabolomics, phenomics, and metagenomics. Among these …

Potassium solubilizing microorganisms as potential biofertilizer: a sustainable climate-resilient approach to improve soil fertility and crop production in agriculture

R Sharma, SS Sindhu, BR Glick - Journal of Plant Growth Regulation, 2024 - Springer
Potassium is the third most important macronutrient for proper growth of plants and its
deficiency limits crop quality and yield. In soil, potassium (K) exists in different forms viz …

Capturing the microbial dark matter in desert soils using culturomics-based metagenomics and high-resolution analysis

S Li, WH Lian, JR Han, M Ali, ZL Lin, YH Liu… - npj Biofilms and …, 2023 - nature.com
Deserts occupy one-third of the Earth's terrestrial surface and represent a potentially
significant reservoir of microbial biodiversity, yet the majority of desert microorganisms …

Designing a synthetic microbial community through genome metabolic modeling to enhance plant–microbe interaction

OS Gonçalves, CJ Creevey, MF Santana - Environmental microbiome, 2023 - Springer
Background Manipulating the rhizosphere microbial community through beneficial
microorganism inoculation has gained interest in improving crop productivity and stress …

Microbiome-mediated strategies to manage major soil-borne diseases of tomato

S Meshram, TB Adhikari - Plants, 2024 - mdpi.com
The tomato (Solanum lycopersicum L.) is consumed globally as a fresh vegetable due to its
high nutritional value and antioxidant properties. However, soil-borne diseases can severely …

Rhizosphere bacterial community is mainly determined by soil environmental factors, but the active bacterial diversity is mainly shaped by plant selection

Y Xu, J Li, C Qiao, J Yang, J Li, X Zheng, C Wang… - BMC microbiology, 2024 - Springer
Background The assembly of the rhizosphere community, even the diazotroph community, is
mainly shaped by soil environmental factors (including soil climate and physiochemical …

[HTML][HTML] Drought stress mitigation through bioengineering of microbes and crop varieties for sustainable agriculture and food security

S Kumar, SS Sindhu - Current Research in Microbial Sciences, 2024 - Elsevier
Climate change and agriculture are intrinsically connected and sudden changes in climatic
conditions adversely impact global food production and security. The climate change-linked …

Agricultural management reshaped the diversity patterns and community assembly of rhizosphere bacterial communities in a desert farming system

WH Lian, MX Li, LX Yue, S Li, ZL Lin, CJ Hu, JR Han… - Applied Soil …, 2024 - Elsevier
Desert farming represents human intervention in previously untouched desert landscapes,
transforming natural desert areas into managed agricultural farmland. Despite the growing …

Mining microbial and metabolic dark matter in extreme environments: a roadmap for harnessing the power of multi-omics data

JR Han, S Li, WJ Li, L Dong - Advanced Biotechnology, 2024 - Springer
Extreme environments such as hyperarid, hypersaline, hyperthermal environments, and the
deep sea harbor diverse microbial communities, which are specially adapted to extreme …

Zinc-solubilizing microorganisms: contributions in nutrient availability and implications for crop productivity in sustainable agriculture

A Sehrawat, SS Sindhu - Plant Holobiome Engineering for Climate-Smart …, 2024 - Springer
Conventional intensive agricultural practices are currently used to make nutrition available
for the ever-increasing global inhabitants. Among various micronutrients, zinc (Zn) performs …