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The Bgee suite: integrated curated expression atlas and comparative transcriptomics in animals
Bgee is a database to retrieve and compare gene expression patterns in multiple animal
species, produced by integrating multiple data types (RNA-Seq, Affymetrix, in situ …
species, produced by integrating multiple data types (RNA-Seq, Affymetrix, in situ …
A benchmark of gene expression tissue-specificity metrics
N Kryuchkova-Mostacci… - Briefings in …, 2017 - academic.oup.com
One of the major properties of genes is their expression pattern. Notably, genes are often
classified as tissue specific or housekee**. This property is of interest to molecular …
classified as tissue specific or housekee**. This property is of interest to molecular …
The concordance between RNA-seq and microarray data depends on chemical treatment and transcript abundance
The concordance of RNA-sequencing (RNA-seq) with microarrays for genome-wide
analysis of differential gene expression has not been rigorously assessed using a range of …
analysis of differential gene expression has not been rigorously assessed using a range of …
Subsets of myeloid-derived suppressor cells in tumor-bearing mice
JI Youn, S Nagaraj, M Collazo… - The Journal of …, 2008 - journals.aai.org
Myeloid-derived suppressor cells (MDSC) are a heterogeneous group of cells that play a
critical role in tumor associated immune suppression. In an attempt to identify a specific …
critical role in tumor associated immune suppression. In an attempt to identify a specific …
Experimental design and low-level analysis of microarray data
Publisher Summary This chapter reviews the design and low-level analysis of microarray
experiments. Microarray experiments are used to quantify and compare gene expression on …
experiments. Microarray experiments are used to quantify and compare gene expression on …
GENEVESTIGATOR. Arabidopsis microarray database and analysis toolbox
High-throughput gene expression analysis has become a frequent and powerful research
tool in biology. At present, however, few software applications have been developed for …
tool in biology. At present, however, few software applications have been developed for …
Characterization of the nature of granulocytic myeloid-derived suppressor cells in tumor-bearing mice
JI Youn, M Collazo, IN Shalova… - Journal of leukocyte …, 2012 - academic.oup.com
MDSCs are a group of cells with potent immune-suppressive activity. These cells
accumulate in many pathologic conditions and play a major role in the regulation of immune …
accumulate in many pathologic conditions and play a major role in the regulation of immune …
[PDF][PDF] The making of gametes in higher plants
Higher plants have evolved to be one of the predominant life forms on this planet. A great
deal of this evolutionary success relies in a very short gametophytic phase which underlies …
deal of this evolutionary success relies in a very short gametophytic phase which underlies …
Biological and molecular heterogeneity of breast cancers correlates with their cancer stem cell content
S Pece, D Tosoni, S Confalonieri, G Mazzarol… - Cell, 2010 - cell.com
Pathways that govern stem cell (SC) function are often subverted in cancer. Here, we report
the isolation to near purity of human normal mammary SCs (hNMSCs), from cultured …
the isolation to near purity of human normal mammary SCs (hNMSCs), from cultured …
Large-scale prediction of long non-coding RNA functions in a coding–non-coding gene co-expression network
Although accumulating evidence has provided insight into the various functions of long-non-
coding RNAs (lncRNAs), the exact functions of the majority of such transcripts are still …
coding RNAs (lncRNAs), the exact functions of the majority of such transcripts are still …