Investigating human neurovascular coupling using functional neuroimaging: a critical review of dynamic models

C Huneau, H Benali, H Chabriat - Frontiers in neuroscience, 2015 - frontiersin.org
The mechanisms that link a transient neural activity to the corresponding increase of
cerebral blood flow (CBF) are termed neurovascular coupling (NVC). They are possibly …

[HTML][HTML] Mathematical framework for large-scale brain network modeling in The Virtual Brain

P Sanz-Leon, SA Knock, A Spiegler, VK Jirsa - Neuroimage, 2015 - Elsevier
In this article, we describe the mathematical framework of the computational model at the
core of the tool The Virtual Brain (TVB), designed to simulate collective whole brain …

The virtual brain integrates computational modeling and multimodal neuroimaging

P Ritter, M Schirner, AR McIntosh, VK Jirsa - Brain connectivity, 2013 - liebertpub.com
Brain function is thought to emerge from the interactions among neuronal populations. Apart
from traditional efforts to reproduce brain dynamics from the micro-to macroscopic scales …

Eigenmodes of brain activity: Neural field theory predictions and comparison with experiment

PA Robinson, X Zhao, KM Aquino, JD Griffiths… - NeuroImage, 2016 - Elsevier
Neural field theory of the corticothalamic system is applied to predict and analyze the activity
eigenmodes of the bihemispheric brain, focusing particularly on their spatial structure. The …

neuRosim: An R package for generating fMRI data

M Welvaert, J Durnez, B Moerkerke… - Journal of Statistical …, 2011 - jstatsoft.org
Studies that validate statistical methods for functional magnetic resonance imaging (fMRI)
data often use simulated data to ensure that the ground truth is known. However, simulated …

Clinical applications of stochastic dynamic models of the brain, part I: a primer

JA Roberts, KJ Friston, M Breakspear - Biological psychiatry: cognitive …, 2017 - Elsevier
Biological phenomena arise through interactions between an organism's intrinsic dynamics
and stochastic forces—random fluctuations due to external inputs, thermal energy, or other …

Characterization of the hemodynamic response function across the majority of human cerebral cortex

AJ Taylor, JH Kim, D Ress - NeuroImage, 2018 - Elsevier
Abstract A brief (< 4 s) period of neural activation evokes a stereotypical sequence of
vascular and metabolic events to create the hemodynamic response function (HRF) …

Hemodynamic traveling waves in human visual cortex

KM Aquino, MM Schira, PA Robinson… - PLoS computational …, 2012 - journals.plos.org
Functional MRI (fMRI) experiments rely on precise characterization of the blood oxygen level
dependent (BOLD) signal. As the spatial resolution of fMRI reaches the sub-millimeter …

Interrelating anatomical, effective, and functional brain connectivity using propagators and neural field theory

PA Robinson - Physical Review E—Statistical, Nonlinear, and Soft …, 2012 - APS
It is shown how to compute effective and functional connection matrices (eCMs and fCMs)
from anatomical CMs (aCMs) and corresponding strength-of-connection matrices (sCMs) …

[HTML][HTML] On the intersection between data quality and dynamical modelling of large-scale fMRI signals

KM Aquino, B Fulcher, S Oldham, L Parkes, L Gollo… - NeuroImage, 2022 - Elsevier
Large-scale dynamics of the brain are routinely modelled using systems of nonlinear
dynamical equations that describe the evolution of population-level activity, with distinct …