Induced pluripotent stem cells (iPSCs): molecular mechanisms of induction and applications

J Cerneckis, H Cai, Y Shi - Signal Transduction and Targeted Therapy, 2024 - nature.com
The induced pluripotent stem cell (iPSC) technology has transformed in vitro research and
holds great promise to advance regenerative medicine. iPSCs have the capacity for an …

Chromatin structure and dynamics: one nucleosome at a time

DM Presman, B Benítez, AL Lafuente… - Histochemistry and Cell …, 2024 - Springer
Eukaryotic genomes store information on many levels, including their linear DNA sequence,
the posttranslational modifications of its constituents (epigenetic modifications), and its three …

Long-axial-range double-helix point spread functions for 3D volumetric super-resolution imaging

Y Nakatani, S Gaumer, Y Shechtman… - The Journal of …, 2024 - ACS Publications
Single-molecule localization microscopy (SMLM) is a powerful tool for observing structures
beyond the diffraction limit of light. Combining SMLM with engineered point spread functions …

[HTML][HTML] Rethinking chromatin accessibility: from compaction to dynamic interactions

T Fillot, D Mazza - Current Opinion in Genetics & Development, 2025 - Elsevier
The genome is traditionally divided into condensed heterochromatin and open euchromatin.
However, recent findings challenge this binary classification and the notion that chromatin …

Tracking live-cell single-molecule dynamics enables measurements of heterochromatin-associated protein–protein interactions

Z Chen, M Seman, Y Fyodorova, A Farhat… - Nucleic acids …, 2024 - academic.oup.com
Visualizing and measuring molecular-scale interactions in living cells represents a major
challenge, but recent advances in single-molecule super-resolution microscopy are bringing …

From Chips-in-Lab to Point-of-Care Live Cell Device: Development of a Microfluidic Device for On-Site Cell Culture and High-Throughput Drug Screening

Y Feng, B Che, J Fu, Y Sun, W Ma, J Tian… - ACS Biomaterials …, 2024 - ACS Publications
Live cell assays provide real-time data of cellular responses. In combination with
microfluidics, applications such as automated and high-throughput drug screening on live …

Visualizing, Quantifying and Map** Chromatin Remodelers at Work with Single-Molecule and Single-Cell Imaging

H Sielaff, ZW Zhao - The International Journal of Biochemistry & Cell …, 2024 - Elsevier
Chromatin remodeling, carried out by four major subfamilies of ATP-dependent remodeler
complexes across eukaryotes, alleviates the topological challenge posed by nucleosomes …

Basic Epigenetic Mechanisms

JR Davie, H Sattarifard, SRN Sudhakar… - … Mechanisms in Health …, 2025 - Springer
The human genome consists of 23 chromosome pairs (22 autosomes and one pair of sex
chromosomes), with 46 chromosomes in a normal cell. In the interphase nucleus, the 2 m …

The Nucleosome Remodelling and Deacetylation complex coordinates the transcriptional response to lineage commitment in pluripotent cells

B Montibus, R Ragheb, E Diamanti, SJ Dunn… - Biology …, 2024 - journals.biologists.com
As cells exit the pluripotent state and begin to commit to a specific lineage they must activate
genes appropriate for that lineage while silencing genes associated with pluripotency and …

Anti-phase clustering of regulatory factors shapes gene transcription burst

B Li, YY Wong, N Flores-Rodriguez, T Davidson… - bioRxiv, 2024 - biorxiv.org
The ability of stem cells to divide and self-renew depends on a complex choreography of
molecular events that maintain the transcriptional oscillation of pluripotency genes. Only a …