[HTML][HTML] Toward modeling metabolic state from single-cell transcriptomics

K Hrovatin, DS Fischer, FJ Theis - Molecular Metabolism, 2022 - Elsevier
Background Single-cell metabolic studies bring new insights into cellular function, which can
often not be captured on other omics layers. Metabolic information has wide applicability …

[HTML][HTML] Thraustochytrids: Evolution, Ultrastructure, Biotechnology, and Modeling

AG Menzorov, DA Iukhtanov… - International …, 2024 - pmc.ncbi.nlm.nih.gov
The thraustochytrids are a group of marine protists known for their significant ecological
roles as decomposers and parasites as well as for their potential biotechnological …

Control Theory and Systems Biology: Potential Applications in Neurodegeneration and Search for Therapeutic Targets

A Angarita-Rodríguez, Y González-Giraldo… - International Journal of …, 2023 - mdpi.com
Control theory, a well-established discipline in engineering and mathematics, has found
novel applications in systems biology. This interdisciplinary approach leverages the …

Phenotype-specific estimation of metabolic fluxes using gene expression data

N González-Arrué, I Inostroza, R Conejeros… - Iscience, 2023 - cell.com
A cell's genome influences its metabolism via the expression of enzyme-related genes, but
transcriptome and fluxome are not perfectly correlated as post-transcriptional mechanisms …

[PDF][PDF] Modelling the effects of microbial transmission and human culture on host-mutualist association

X **ong - 2023 - unsworks.unsw.edu.au
Humans harbour diverse microbial communities, and this interaction has fitness
consequences for hosts and symbionts. Understanding the mechanisms that preserve host …

On the integration of process engineering with metabolomics for the production of muconic acid: the case for saccharomyces cerevisiae

S Xenios, D Weilandt, H Vasilis, L Miskovic… - Computer aided …, 2022 - Elsevier
Muconic acid is a high value product which has gathered interest in applications in the
manufacture of new resins, bio plastics, food additives, agrochemicals and pharmaceuticals …

[PDF][PDF] Phenotype-specific estimation of metabolic fluxes using gene expression data

I Arrue, R Inostroza - academia.edu
SUMMARY A cell's genome influences its metabolism via the expression of enzyme-related
genes, but transcriptome and fluxome are not perfectly correlated as post-transcriptional …

Modelado computacional de la composición bacteriana intestinal en el contexto de la enfermedad de Parkinson

LJ Forero Rodriguez - repositorio.unal.edu.co
La Enfermedad de Parkinson (EP) es una enfermedad neurodegenerativa de carácter
progresivo y crónico, principal causa de pérdida de coordinación de los movimientos …

Identificación y clasificación de las rutas metabólicas de las especies de Leptospira spp

ÓG Beltrán - repositorio.unal.edu.co
El aislamiento de Leptospira spp. es considerado como la prueba de laboratorio de mayor
fiabilidad para el diagnostico de leptospirosis. Sin embargo, las limitaciones del cultivo …

Simulación de una cámara anódica y el efecto de su composición sobre la e ciencia de una celda de combustible microbiana

EA Chingaté Barbosa - repositorio.unal.edu.co
Se desarrolló un modelo de la cámara anódica en una celda de combustible microbiana
para mejorar la comprensión de los fenómenos biológicos que suceden al interior de dicho …