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Metabolic networks: how to identify key components in the regulation of metabolism and growth
Plants display enormous diversity in their metabolism. Although the biosynthesis and
function of the myriad plant metabolites have been studied for decades, we have little …
function of the myriad plant metabolites have been studied for decades, we have little …
Metabolomics integrated with transcriptomics: assessing systems response to sulfur‐deficiency stress
R Hoefgen, VJ Nikiforova - Physiologia Plantarum, 2008 - Wiley Online Library
Sulfur‐containing amino acids, cysteine and methionine synthesized in plants are essential
for human and animal nutrition. That is why understanding of how inorganic sulfur is taken …
for human and animal nutrition. That is why understanding of how inorganic sulfur is taken …
Gene and metabolite regulatory network analysis of early develo** fruit tissues highlights new candidate genes for the control of tomato fruit composition and …
F Mounet, A Moing, V Garcia, J Petit… - Plant …, 2009 - academic.oup.com
Variations in early fruit development and composition may have major impacts on the taste
and the overall quality of ripe tomato (Solanum lycopersicum) fruit. To get insights into the …
and the overall quality of ripe tomato (Solanum lycopersicum) fruit. To get insights into the …
Combined transcription factor profiling, microarray analysis and metabolite profiling reveals the transcriptional control of metabolic shifts occurring during tomato fruit …
J Rohrmann, T Tohge, R Alba, S Osorio… - The Plant …, 2011 - Wiley Online Library
Maturation of fleshy fruits such as tomato (Solanum lycopersicum) is subject to tight genetic
control. Here we describe the development of a quantitative real‐time PCR platform that …
control. Here we describe the development of a quantitative real‐time PCR platform that …
Competing endogenous RNA networks underlying anatomical and physiological characteristics of poplar wood in acclimation to low nitrogen availability
Y Lu, S Deng, Z Li, J Wu, Q Liu, W Liu… - Plant and Cell …, 2019 - academic.oup.com
Although poplar plantations are often established on nitrogen (N)-poor soil, the
physiological and molecular mechanisms underlying wood properties of poplars in …
physiological and molecular mechanisms underlying wood properties of poplars in …
Correlation Network Analysis reveals a sequential reorganization of metabolic and transcriptional states during germination and gene-metabolite relationships in …
E Allen, A Moing, TMD Ebbels, M Maucourt… - BMC systems …, 2010 - Springer
Background Holistic profiling and systems biology studies of nutrient availability are
providing more and more insight into the mechanisms by which gene expression responds …
providing more and more insight into the mechanisms by which gene expression responds …
Stability of Metabolic Correlations under Changing Environmental Conditions in Escherichia coli – A Systems Approach
Background Biological systems adapt to changing environments by reorganizing their
cellular and physiological program with metabolites representing one important response …
cellular and physiological program with metabolites representing one important response …
Characterization of dietary protein-dependent amino acid metabolism by linking free amino acids with transcriptional profiles through analysis of correlation
Y Noguchi, N Shikata, Y Furuhata… - Physiological …, 2008 - journals.physiology.org
This study aims to characterize diet-dependent amino acid metabolism by linking profiles of
amino acids concentrations (“aminograms”) with transcript datasets through the analysis of …
amino acids concentrations (“aminograms”) with transcript datasets through the analysis of …
[HTML][HTML] Sulfur assimilation and regulation of abiotic stress via OMICS
BA Mir, R Kumari, G Rakhra, P Parihar, R Singh… - Plant Stress, 2024 - Elsevier
Abiotic stress, which includes salinity, drought, heat, and cold, as well as their many
combinations, severely reduces crop productivity across the globe each year. Considering …
combinations, severely reduces crop productivity across the globe each year. Considering …
Analysis of systemic sulfur metabolism in plants using integrated '-omics' strategies
MY Hirai, K Saito - Molecular BioSystems, 2008 - pubs.rsc.org
Sulfur (S) assimilation by plants plays a key role in the S cycle in nature, and metabolism of
the assimilated S provides various compounds that are useful for animals, including …
the assimilated S provides various compounds that are useful for animals, including …