Evolutionary pathways and trajectories in antibiotic resistance

F Baquero, JL Martinez, V F. Lanza… - Clinical Microbiology …, 2021 - Am Soc Microbiol
Evolution is the hallmark of life. Descriptions of the evolution of microorganisms have
provided a wealth of information, but knowledge regarding “what happened” has precluded …

Core principles of bacterial autoinducer systems

BA Hense, M Schuster - Microbiology and Molecular Biology …, 2015 - Am Soc Microbiol
Autoinduction (AI), the response to self-produced chemical signals, is widespread in the
bacterial world. This process controls vastly different target functions, such as luminescence …

Mechanisms of competition in biofilm communities

O Rendueles, JM Ghigo - Microbial biofilms, 2015 - Wiley Online Library
The rapid development of new sequencing technologies and the use of metagenomics
revealed the great diversity of microbial life and enabled the emergence of a new …

[HTML][HTML] Design, analysis and application of synthetic microbial consortia

X Jia, C Liu, H Song, M Ding, J Du, Q Ma… - Synthetic and Systems …, 2016 - Elsevier
The rapid development of synthetic biology has conferred almost perfect modification on
single cells, and provided methodological support for synthesizing microbial consortia …

Non-constant steady states and Hopf bifurcation of a species interaction model

M Chen, R Wu, X Wang - … in Nonlinear Science and Numerical Simulation, 2023 - Elsevier
In this paper, we are concerned with the species interaction model with the ratio-dependent
Holling III functional response and strong Allee effect. To explore nonhomogeneous …

Mathematical models for cholera dynamics—A review

J Wang - Microorganisms, 2022 - mdpi.com
Cholera remains a significant public health burden in many countries and regions of the
world, highlighting the need for a deeper understanding of the mechanisms associated with …

Fast growth can counteract antibiotic susceptibility in sha** microbial community resilience to antibiotics

DR Amor, J Gore - Proceedings of the National Academy of …, 2022 - National Acad Sciences
Microbial communities often face external perturbations that can induce lasting changes in
their composition and functions. Our understanding of how multispecies communities …

Self-organized patchiness facilitates survival in a cooperatively growing Bacillus subtilis population

C Ratzke, J Gore - Nature microbiology, 2016 - nature.com
Ecosystems are highly structured. Organisms are not randomly distributed but can be found
in spatial aggregates at many scales, leading to spatial heterogeneity or even regular …

Optogenetic characterization methods overcome key challenges in synthetic and systems biology

EJ Olson, JJ Tabor - Nature chemical biology, 2014 - nature.com
Abstract Systems biologists aim to understand how organism-level processes, such as
differentiation and multicellular development, are encoded in DNA. Conversely, synthetic …

Synthetic biology: A bridge between artificial and natural cells

Y Ding, F Wu, C Tan - Life, 2014 - mdpi.com
Artificial cells are simple cell-like entities that possess certain properties of natural cells. In
general, artificial cells are constructed using three parts:(1) biological membranes that serve …