Protein analysis by shotgun/bottom-up proteomics

Y Zhang, BR Fonslow, B Shan, MC Baek… - Chemical …, 2013 - ACS Publications
According to Genome Sequencing Project statistics (http://www. ncbi. nlm. nih.
gov/genomes/static/gpstat. html), as of February 16, 2012, complete gene sequences have …

Urine in clinical proteomics

S Decramer, AG de Peredo, B Breuil, H Mischak… - Molecular & cellular …, 2008 - ASBMB
Urine has become one of the most attractive biofluids in clinical proteomics as it can be
obtained non-invasively in large quantities and is stable compared with other biofluids. The …

Naturally occurring human urinary peptides for use in diagnosis of chronic kidney disease

DM Good, P Zürbig, A Argiles, HW Bauer… - Molecular & cellular …, 2010 - ASBMB
Because of its availability, ease of collection, and correlation with physiology and pathology,
urine is an attractive source for clinical proteomics/peptidomics. However, the lack of …

A biomarker panel for acute graft-versus-host disease

S Paczesny, OI Krijanovski, TM Braun… - Blood, The Journal …, 2009 - ashpublications.org
No validated biomarkers exist for acute graft-versus-host disease (GVHD). We screened
plasma with antibody microarrays for 120 proteins in a discovery set of 42 patients who …

Recommendations for biomarker identification and qualification in clinical proteomics

H Mischak, G Allmaier, R Apweiler, T Attwood… - Science translational …, 2010 - science.org
Clinical proteomics has yielded some early positive results—the identification of potential
disease biomarkers—indicating the promise for this analytical approach to improve the …

Acute graft-versus-host disease: from the bench to the bedside

G Socié, BR Blazar - Blood, The Journal of the American …, 2009 - ashpublications.org
During the past decade, progress in basic immunology has been impressive. In parallel,
whereas our understanding of the pathophysiology of acute graft-versus-host disease …

Elafin is a biomarker of graft-versus-host disease of the skin

S Paczesny, TM Braun, JE Levine, J Hogan… - Science translational …, 2010 - science.org
Graft-versus-host disease (GVHD), the major complication of allogeneic bone marrow
transplantation, affects the skin, liver, and gastrointestinal tract. There are no plasma …

Peptidomics and proteomics based on CE‐MS as a robust tool in clinical application: The past, the present, and the future

A Latosinska, J Siwy, H Mischak, M Frantzi - Electrophoresis, 2019 - Wiley Online Library
Capillary electrophoresis combined with mass spectrometry (CE‐MS) has been used for
several years for the investigation of proteins and peptides as biomarkers for diagnosis and …

Quantitative urinary proteome analysis for biomarker evaluation in chronic kidney disease

J Jantos-Siwy, E Schiffer, K Brand… - Journal of proteome …, 2009 - ACS Publications
A limitation of proteomic methods with respect to their clinical applicability is the lack of
possibilities to directly deduce the amount of a protein or peptide from a particular mass …

Body fluid proteomics for biomarker discovery: lessons from the past hold the key to success in the future

DM Good, V Thongboonkerd, J Novak… - Journal of proteome …, 2007 - ACS Publications
Sparked by the article from Lescuyer and colleagues in a recent issue, we aim here to
further encourage interest in and discussion of clinically relevant biomarker research. We …