Recent advances in activity-based probes (ABPs) and affinity-based probes (A f BPs) for profiling of enzymes

H Fang, B Peng, SY Ong, Q Wu, L Li, SQ Yao - Chemical science, 2021 - pubs.rsc.org
Activity-based protein profiling (ABPP) is a technique that uses highly selective active-site
targeted chemical probes to label and monitor the state of proteins. ABPP integrates the …

Plant glycosides and glycosidases: a treasure-trove for therapeutics

K Kytidou, M Artola, HS Overkleeft… - Frontiers in plant …, 2020 - frontiersin.org
Plants contain numerous glycoconjugates that are metabolized by specific
glucosyltransferases and hydrolyzed by specific glycosidases, some also catalyzing …

Glycosidase-targeting small molecules for biological and therapeutic applications

Y Kim, H Li, J Choi, J Boo, H Jo, JY Hyun… - Chemical Society …, 2023 - pubs.rsc.org
Glycosidases are ubiquitous enzymes that catalyze the hydrolysis of glycosidic linkages in
oligosaccharides and glycoconjugates. These enzymes play a vital role in a wide variety of …

Covalent protein modification: the current landscape of residue-specific electrophiles

DA Shannon, E Weerapana - Current opinion in chemical biology, 2015 - Elsevier
Highlights•Electrophiles can show distinct amino-acid selectivities in proteomes.•The
judicious selection of an electrophile is critical to various chemical-proteomic applications.•A …

Glycosidase and glycan polymorphism control hydrolytic release of immunogenic flagellin peptides

P Buscaill, B Chandrasekar, N Sanguankiattichai… - Science, 2019 - science.org
INTRODUCTION Immunogenic flagellin fragments are a signature of bacterial invasion in
both plants and animals. Plants recognize flagellin fragments via flagellin sensitive 2 (FLS2) …

Assessing Squarates as Amine-Reactive Probes

KI Taylor, JS Ho, HO Trial, AW Carter… - Journal of the …, 2023 - ACS Publications
Probes that covalently label protein targets facilitate the identification of ligand-binding sites.
Lysine residues are prevalent in the proteome, making them attractive substrates for …

Applications and opportunities of click chemistry in plant science

MM Chen, PM Kopittke, FJ Zhao, P Wang - Trends in Plant Science, 2024 - cell.com
Abstract The Nobel Prize in Chemistry for 2022 was awarded to the pioneers of Lego-like
'click chemistry': combinatorial chemistry with remarkable modularity and diversity. It has …

From mechanism-based retaining glycosidase inhibitors to activity-based glycosidase profiling

M Artola, JMFG Aerts, GA van der Marel… - Journal of the …, 2024 - ACS Publications
Activity-based protein profiling (ABPP) is an effective technology for the identification and
functional annotation of enzymes in complex biological samples. ABP designs are normally …

Activity-based probes for functional interrogation of retaining β-glucuronidases

L Wu, J Jiang, Y **, WW Kallemeijn, CL Kuo… - Nature chemical …, 2017 - nature.com
Humans express at least two distinct β-glucuronidase enzymes that are involved in disease:
exo-acting β-glucuronidase (GUSB), whose deficiency gives rise to mucopolysaccharidosis …

Current developments in activity-based protein profiling

LI Willems, HS Overkleeft… - Bioconjugate …, 2014 - ACS Publications
Activity-based protein profiling (ABPP) has emerged as a powerful strategy to study the
activity of enzymes in complex proteomes. The aim of ABPP is to selectively visualize only …