A critical step of genome sequence analysis is the map** of sequenced DNA fragments
(ie, reads) collected from an individual to a known linear reference genome sequence (ie …

Development of future sensor, memory, and computing nanodevices based on novel
physical concepts is one of the significant research endeavors in solid-state research. The …

In the last years, advances in genome sequencing technologies have enabled the
proliferation of genomic applications that guide personalized medicine. These applications …

In the last years, advances in next-generation sequencing technologies have enabled the
proliferation of genomic applications that guide personalized medicine. These applications …

High-throughput sequencing (HTS) technologies have revolutionized the field of genomics,
enabling rapid and cost-effective genome analysis for various applications. However, the …

Pairwise sequence alignment is one of the most fundamental and computationally intensive
steps in genome analysis. With the improving costs and throughput of third-generation …

Nanopore sequencing is a widely-used high-throughput genome sequencing technology
that can sequence long fragments of a genome into raw electrical signals at low cost …

DNA short read alignment task has become a major sequential bottleneck to humongous
amounts of data generated by next-generation sequencing platforms. In this paper, an …

The conventional computing paradigm struggles to fulfill the rapidly growing demands from
emerging applications, especially those for machine intelligence because much of the …

Nanopore sequencers generate electrical raw signals in real-time while sequencing long
genomic strands. These raw signals can be analyzed as they are generated, providing an …