FOXO transcription factor family in cancer and metastasis

Y Jiramongkol, EWF Lam - Cancer and Metastasis Reviews, 2020 - Springer
Forkhead box O (FOXO) transcription factors regulate diverse biological processes, affecting
development, metabolism, stem cell maintenance and longevity. They have also been …

Forkhead box proteins: tuning forks for transcriptional harmony

EWF Lam, JJ Brosens, AR Gomes, CY Koo - Nature Reviews Cancer, 2013 - nature.com
Forkhead box (FOX) proteins are multifaceted transcription factors that are responsible for
fine-tuning the spatial and temporal expression of a broad range of genes both during …

TRRUST v2: an expanded reference database of human and mouse transcriptional regulatory interactions

H Han, JW Cho, S Lee, A Yun, H Kim… - Nucleic acids …, 2018 - academic.oup.com
Transcription factors (TFs) are major trans-acting factors in transcriptional regulation.
Therefore, elucidating TF–target interactions is a key step toward understanding the …

Benchmark and integration of resources for the estimation of human transcription factor activities

L Garcia-Alonso, CH Holland, MM Ibrahim… - Genome …, 2019 - genome.cshlp.org
The prediction of transcription factor (TF) activities from the gene expression of their targets
(ie, TF regulon) is becoming a widely used approach to characterize the functional status of …

HOCOMOCO: towards a complete collection of transcription factor binding models for human and mouse via large-scale ChIP-Seq analysis

IV Kulakovskiy, IE Vorontsov, IS Yevshin… - Nucleic acids …, 2018 - academic.oup.com
We present a major update of the HOCOMOCO collection that consists of patterns
describing DNA binding specificities for human and mouse transcription factors. In this …

JASPAR 2014: an extensively expanded and updated open-access database of transcription factor binding profiles

A Mathelier, X Zhao, AW Zhang, F Parcy… - Nucleic acids …, 2014 - academic.oup.com
Abstract JASPAR (http://jaspar. genereg. net) is the largest open-access database of matrix-
based nucleotide profiles describing the binding preference of transcription factors from …

[HTML][HTML] The FOXO3-FOXM1 axis: A key cancer drug target and a modulator of cancer drug resistance

S Yao, LYN Fan, EWF Lam - Seminars in cancer biology, 2018 - Elsevier
The FOXO3 and FOXM1 forkhead box transcription factors, functioning downstream of the
essential PI3K-Akt, Ras-ERK and JNK/p38MAPK signalling cascades, are crucial for cell …

RNA cytosine methylation and methyltransferases mediate chromatin organization and 5-azacytidine response and resistance in leukaemia

JX Cheng, L Chen, Y Li, A Cloe, M Yue, J Wei… - Nature …, 2018 - nature.com
The roles of RNA 5-methylcytosine (RNA: m5C) and RNA: m5C methyltransferases (RCMTs)
in lineage-associated chromatin organization and drug response/resistance are unclear …

The forkhead-box family of transcription factors: key molecular players in colorectal cancer pathogenesis

P Laissue - Molecular cancer, 2019 - Springer
Colorectal cancer (CRC) is the third most commonly occurring cancer worldwide and the
fourth most frequent cause of death having an oncological origin. It has been found that …

GATA3-dependent cellular reprogramming requires activation-domain dependent recruitment of a chromatin remodeler

M Takaku, SA Grimm, T Shimbo, L Perera, R Menafra… - Genome biology, 2016 - Springer
Background Transcription factor-dependent cellular reprogramming is integral to normal
development and is central to production of induced pluripotent stem cells. This process …