Directed evolution: methodologies and applications

Y Wang, P Xue, M Cao, T Yu, ST Lane… - Chemical reviews, 2021 - ACS Publications
Directed evolution aims to expedite the natural evolution process of biological molecules
and systems in a test tube through iterative rounds of gene diversifications and library …

Metabolic engineering: methodologies and applications

MJ Volk, VG Tran, SI Tan, S Mishra, Z Fatma… - Chemical …, 2022 - ACS Publications
Metabolic engineering aims to improve the production of economically valuable molecules
through the genetic manipulation of microbial metabolism. While the discipline is a little over …

[HTML][HTML] Engineering complex synthetic transcriptional programs with CRISPR RNA scaffolds

JG Zalatan, ME Lee, R Almeida, LA Gilbert… - Cell, 2015 - cell.com
Eukaryotic cells execute complex transcriptional programs in which specific loci throughout
the genome are regulated in distinct ways by targeted regulatory assemblies. We have …

Recent advances in systems and synthetic biology approaches for develo** novel cell-factories in non-conventional yeasts

P Patra, M Das, P Kundu, A Ghosh - Biotechnology Advances, 2021 - Elsevier
Microbial bioproduction of chemicals, proteins, and primary metabolites from cheap carbon
sources is currently an advancing area in industrial research. The model yeast …

Improving fatty acids production by engineering dynamic pathway regulation and metabolic control

P Xu, L Li, F Zhang… - Proceedings of the …, 2014 - National Acad Sciences
Global energy demand and environmental concerns have stimulated increasing efforts to
produce carbon-neutral fuels directly from renewable resources. Microbially derived …

Metabolic engineering of Escherichia coli using CRISPR–Cas9 meditated genome editing

Y Li, Z Lin, C Huang, Y Zhang, Z Wang, Y Tang… - Metabolic …, 2015 - Elsevier
Engineering cellular metabolism for improved production of valuable chemicals requires
extensive modulation of bacterial genome to explore complex genetic spaces. Here, we …

Recent advances in metabolic engineering of Saccharomyces cerevisiae: new tools and their applications

J Lian, S Mishra, H Zhao - Metabolic engineering, 2018 - Elsevier
Metabolic engineering aims to develop efficient cell factories by rewiring cellular
metabolism. As one of the most commonly used cell factories, Saccharomyces cerevisiae …

Combinatorial metabolic engineering using an orthogonal tri-functional CRISPR system

J Lian, M HamediRad, S Hu, H Zhao - Nature communications, 2017 - nature.com
Designing an optimal microbial cell factory often requires overexpression, knock-down, and
knock-out of multiple gene targets. Unfortunately, such rewiring of cellular metabolism is …

Improving industrial yeast strains: exploiting natural and artificial diversity

J Steensels, T Snoek, E Meersman… - FEMS microbiology …, 2014 - academic.oup.com
Yeasts have been used for thousands of years to make fermented foods and beverages,
such as beer, wine, sake, and bread. However, the choice for a particular yeast strain or …

Modular optimization of multi-gene pathways for fatty acids production in E. coli

P Xu, Q Gu, W Wang, L Wong, AGW Bower… - Nature …, 2013 - nature.com
Microbial fatty acid-derived fuels have emerged as promising alternatives to petroleum-
based transportation fuels. Here we report a modular engineering approach that …