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The soil microbiome—from metagenomics to metaphenomics
Soil microorganisms carry out important processes, including support of plant growth and
cycling of carbon and other nutrients. However, the majority of soil microbes have not yet …
cycling of carbon and other nutrients. However, the majority of soil microbes have not yet …
Dynamics of ecological communities following current retreat of glaciers
Glaciers are retreating globally, and the resulting ice-free areas provide an experimental
system for understanding species colonization patterns, community formation, and …
system for understanding species colonization patterns, community formation, and …
Gcfagg: Global and cross-view feature aggregation for multi-view clustering
Multi-view clustering can partition data samples into their categories by learning a
consensus representation in unsupervised way and has received more and more attention …
consensus representation in unsupervised way and has received more and more attention …
A host–microbiota interactome reveals extensive transkingdom connectivity
The myriad microorganisms that live in close association with humans have diverse effects
on physiology, yet the molecular bases for these impacts remain mostly unknown …
on physiology, yet the molecular bases for these impacts remain mostly unknown …
Multi-view low-rank sparse subspace clustering
Most existing approaches address multi-view subspace clustering problem by constructing
the affinity matrix on each view separately and afterwards propose how to extend spectral …
the affinity matrix on each view separately and afterwards propose how to extend spectral …
Gapseq: informed prediction of bacterial metabolic pathways and reconstruction of accurate metabolic models
Genome-scale metabolic models of microorganisms are powerful frameworks to predict
phenotypes from an organism's genotype. While manual reconstructions are laborious …
phenotypes from an organism's genotype. While manual reconstructions are laborious …
Unsupervised multi-view K-means clustering algorithm
MS Yang, I Hussain - IEEE Access, 2023 - ieeexplore.ieee.org
Since advanced technologies via social media, internet, virtual communities and networks
and internet of things (IoT), there are more multi-view data to be collected. Multi-view …
and internet of things (IoT), there are more multi-view data to be collected. Multi-view …
A positive correlation between GC content and growth temperature in prokaryotes
EZ Hu, XR Lan, ZL Liu, J Gao, DK Niu - BMC genomics, 2022 - Springer
Background GC pairs are generally more stable than AT pairs; GC-rich genomes were
proposed to be more adapted to high temperatures than AT-rich genomes. Previous studies …
proposed to be more adapted to high temperatures than AT-rich genomes. Previous studies …
Self-weighted contrastive fusion for deep multi-view clustering
Multi-view clustering can explore consensus information from multiple views and has
attracted increasing attention in the past two decades. However, existing works face two …
attracted increasing attention in the past two decades. However, existing works face two …
Application and challenge of 3rd generation sequencing for clinical bacterial studies
Over the past 25 years, the powerful combination of genome sequencing and bioinformatics
analysis has played a crucial role in interpreting information encoded in bacterial genomes …
analysis has played a crucial role in interpreting information encoded in bacterial genomes …