Phylogenomics and the flowering plant tree of life

C Guo, Y Luo, LM Gao, TS Yi, HT Li… - Journal of Integrative …, 2023 - Wiley Online Library
The advances accelerated by next‐generation sequencing and long‐read sequencing
technologies continue to provide an impetus for plant phylogenetic study. In the past …

A trans-oceanic flight of over 4,200 km by painted lady butterflies

T Suchan, CP Bataille, MS Reich… - Nature …, 2024 - nature.com
The extent of aerial flows of insects circulating around the planet and their impact on
ecosystems and biogeography remain enigmatic because of methodological challenges …

Genome assemblies of 11 bamboo species highlight diversification induced by dynamic subgenome dominance

PF Ma, YL Liu, C Guo, G **, ZH Guo, L Mao… - Nature Genetics, 2024 - nature.com
Polyploidy (genome duplication) is a pivotal force in evolution. However, the interactions
between parental genomes in a polyploid nucleus, frequently involving subgenome …

Phylogenomics and species delimitation of the economically important Black Basses (Micropterus)

D Kim, AT Taylor, TJ Near - Scientific Reports, 2022 - nature.com
Informed management and conservation efforts are vital to sustainable recreational fishing
and biodiversity conservation. Because the taxonomic rank of species is important in …

Next-generation data filtering in the genomics era

W Hemstrom, JA Grummer, G Luikart… - Nature Reviews …, 2024 - nature.com
Genomic data are ubiquitous across disciplines, from agriculture to biodiversity, ecology,
evolution and human health. However, these datasets often contain noise or errors and are …

Conflicting phylogenomic signals reveal a pattern of reticulate evolution in a recent high‐Andean diversification (Asteraceae: Astereae: Diplostephium)

OM Vargas, EM Ortiz, BB Simpson - New Phytologist, 2017 - Wiley Online Library
High‐throughput sequencing is hel** biologists to overcome the difficulties of inferring the
phylogenies of recently diverged taxa. The present study analyzes the phylogenetic signal of …

A few essential genetic loci distinguish Penstemon species with flowers adapted to pollination by bees or hummingbirds

CA Wessinger, AM Katzer, PM Hime, MD Rausher… - PLoS …, 2023 - journals.plos.org
In the formation of species, adaptation by natural selection generates distinct combinations
of traits that function well together. The maintenance of adaptive trait combinations in the …

Evaluating DNA barcoding for species identification and discovery in European gracillariid moths

C Lopez-Vaamonde, N Kirichenko, A Cama… - Frontiers in Ecology …, 2021 - frontiersin.org
Gracillariidae is the most species-rich leaf-mining moth family with over 2,000 described
species worldwide. In Europe, there are 263 valid named species recognized, many of …

Species delimitation in endangered groundwater salamanders: Implications for aquifer management and biodiversity conservation

TJ Devitt, AM Wright… - Proceedings of the …, 2019 - National Acad Sciences
Groundwater-dependent species are among the least-known components of global
biodiversity, as well as some of the most vulnerable because of rapid groundwater depletion …

Untying Gordian knots: unraveling reticulate polyploid plant evolution by genomic data using the large Ranunculus auricomus species complex

K Karbstein, S Tomasello, L Hodač, N Wagner… - New …, 2022 - Wiley Online Library
Speciation via hybridization and polyploidization is a major evolutionary force in plant
evolution but is still poorly understood for neopolyploid groups. Challenges are attributed to …