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Natural antisense transcripts as versatile regulators of gene expression
Long non-coding RNAs (lncRNAs) are emerging as a major class of gene products that
have central roles in cell and developmental biology. Natural antisense transcripts (NATs) …
have central roles in cell and developmental biology. Natural antisense transcripts (NATs) …
High titer production of gastrodin enabled by systematic refactoring of yeast genome and an antisense-transcriptional regulation toolkit
Gastrodin, a phenolic glycoside, is a prominent component of Gastrodia elata, which is
renowned for its sedative, hypnotic, anticonvulsant, and neuroprotective activities …
renowned for its sedative, hypnotic, anticonvulsant, and neuroprotective activities …
Pervasive transcription: a controlled risk
T Villa, O Porrua - The FEBS Journal, 2023 - Wiley Online Library
Transcriptome‐wide interrogation of eukaryotic genomes has unveiled the pervasive nature
of RNA polymerase II transcription. Virtually, any DNA region with an accessible chromatin …
of RNA polymerase II transcription. Virtually, any DNA region with an accessible chromatin …
Transcription elongation is finely tuned by dozens of regulatory factors
Understanding the complex network that regulates transcription elongation requires the
quantitative analysis of RNA polymerase II (Pol II) activity in a wide variety of regulatory …
quantitative analysis of RNA polymerase II (Pol II) activity in a wide variety of regulatory …
Large scale microfluidic CRISPR screening for increased amylase secretion in yeast
Key to our ability to increase recombinant protein production through secretion is a better
understanding of the pathways that interact to translate, process and export mature proteins …
understanding of the pathways that interact to translate, process and export mature proteins …
High-resolution analysis of cell-state transitions in yeast suggests widespread transcriptional tuning by alternative starts
Background The start and end sites of messenger RNAs (TSSs and TESs) are highly
regulated, often in a cell-type-specific manner. Yet the contribution of transcript diversity in …
regulated, often in a cell-type-specific manner. Yet the contribution of transcript diversity in …
Histone sumoylation promotes Set3 histone-deacetylase complex-mediated transcriptional regulation
Histones are substrates of the SUMO (small ubiquitin-like modifier) conjugation pathway.
Several reports suggest histone sumoylation affects transcription negatively, but …
Several reports suggest histone sumoylation affects transcription negatively, but …
[HTML][HTML] Epigenetic regulation by lncRNAs: an overview focused on UCA1 in colorectal cancer
B Neve, N Jonckheere, A Vincent, I Van Seuningen - Cancers, 2018 - mdpi.com
Colorectal cancers have become the second leading cause of cancer-related deaths. In
particular, acquired chemoresistance and metastatic lesions occurring in colorectal cancer …
particular, acquired chemoresistance and metastatic lesions occurring in colorectal cancer …
Hypoxic regulation of hypoxia inducible factor 1 alpha via antisense transcription
N Downes, H Niskanen, VT Bosch, M Taipale… - Journal of Biological …, 2023 - jbc.org
Impaired oxygen homeostasis is a frequently encountered pathophysiological factor in
multiple complex diseases, including cardiovascular disease and cancer. While the …
multiple complex diseases, including cardiovascular disease and cancer. While the …
A Systematic Review on Quiescent State Research Approaches in S. cerevisiae
Quiescence, the temporary and reversible arrest of cell growth, is a fundamental biological
process. However, the lack of standardization in terms of reporting the experimental details …
process. However, the lack of standardization in terms of reporting the experimental details …