Multireference approaches for excited states of molecules

H Lischka, D Nachtigallova, AJA Aquino… - Chemical …, 2018 - ACS Publications
Understanding the properties of electronically excited states is a challenging task that
becomes increasingly important for numerous applications in chemistry, molecular physics …

Nucleic acids as a playground for the computational study of the photophysics and photochemistry of multichromophore assemblies

L Martínez Fernández, F Santoro… - Accounts of Chemical …, 2022 - ACS Publications
Conspectus The interaction between light and multichromophoric assemblies (MCAs) is the
primary event of many fundamental processes, from photosynthesis to organic photovoltaics …

Formation of long-lived dark states during electronic relaxation of pyrimidine nucleobases studied using extreme ultraviolet time-resolved photoelectron spectroscopy

Y Miura, Y Yamamoto, S Karashima… - Journal of the …, 2023 - ACS Publications
Ultrafast electronic relaxation of nucleobases from 1ππ* states to the ground state (S0) is
considered essential for the photostability of DNA. However, transient absorption …

Quantum chemical modeling of the photoinduced activity of multichromophoric biosystems: focus review

F Segatta, L Cupellini, M Garavelli… - Chemical reviews, 2019 - ACS Publications
Multichromophoric biosystems represent a broad family with very diverse members, ranging
from light-harvesting pigment–protein complexes to nucleic acids. The former are designed …

Ultrafast Formation of a Delocalized Triplet-Excited State in an Epigenetically Modified DNA Duplex under Direct UV Excitation

X Wang, L Martínez-Fernández, Y Zhang… - Journal of the …, 2024 - ACS Publications
Epigenetic modifications impart important functionality to nucleic acids during gene
expression but may increase the risk of photoinduced gene mutations. Thus, it is crucial to …

Triplet Excimer Formation in a DNA Duplex with Silver Ion-Mediated Base Pairs

L Martínez-Fernández, FR Kohl, Y Zhang… - Journal of the …, 2024 - ACS Publications
The dynamics of excited electronic states in self-assembled structures formed between silver
(I) ions and cytosine-containing DNA strands or monomeric cytosine derivatives were …

Ultrafast dynamics of the two lowest bright excited states of cytosine and 1-methylcytosine: A quantum dynamical study

M Yaghoubi Jouybari, Y Liu, R Improta… - Journal of Chemical …, 2020 - ACS Publications
The nonadiabatic quantum dynamics (QD) of cytosine and 1-methylcytosine in the gas
phase is simulated for 250 fs after a photoexcitation to one of the first two bright states. The …

Effect of the thermal fluctuations of the photophysics of GC and CG DNA steps: a computational dynamical study

H Asha, JA Green, L Esposito… - The Journal of …, 2022 - ACS Publications
Here we refine and assess two computational procedures aimed to include the effect of
thermal fluctuations on the electronic spectra and the ultrafast excited state dynamics of …

Fragment diabatization linear vibronic coupling Model for quantum dynamics of multichromophoric systems: population of the charge-transfer state in the photoexcited …

JA Green, M Yaghoubi Jouybari, H Asha… - Journal of Chemical …, 2021 - ACS Publications
We introduce a method (FrD-LVC) based on a fragment diabatization (FrD) for the
parametrization of a linear vibronic coupling (LVC) model suitable for studying the …

Shedding Light on the Photophysics and Photochemistry of I-Motifs Using Quantum Mechanical Calculations

R Improta - International Journal of Molecular Sciences, 2023 - mdpi.com
I-motifs are non-canonical DNA structures formed by intercalated hemiprotonated (CH· C)+
pairs, ie, formed by a cytosine (C) and a protonated cytosine (CH+), which are currently …