[HTML][HTML] From diversity to complexity: Microbial networks in soils

K Guseva, S Darcy, E Simon, LV Alteio… - Soil Biology and …, 2022 - Elsevier
Network analysis has been used for many years in ecological research to analyze
organismal associations, for example in food webs, plant-plant or plant-animal interactions …

Herbarium data: Global biodiversity and societal botanical needs for novel research

SA James, PS Soltis, L Belbin… - Applications in plant …, 2018 - Wiley Online Library
Building on centuries of research based on herbarium specimens gathered through time
and around the globe, a new era of discovery, synthesis, and prediction using digitized …

Co‐occurrence is not evidence of ecological interactions

FG Blanchet, K Cazelles, D Gravel - Ecology Letters, 2020 - Wiley Online Library
There is a rich amount of information in co‐occurrence (presence–absence) data that could
be used to understand community assembly. This proposition first envisioned by Forbes …

Biotic interactions in species distribution modelling: 10 questions to guide interpretation and avoid false conclusions

CF Dormann, M Bobrowski, DM Dehling… - Global ecology and …, 2018 - Wiley Online Library
Aim Recent studies increasingly use statistical methods to infer biotic interactions from co‐
occurrence information at a large spatial scale. However, disentangling biotic interactions …

Soil macroinvertebrate communities: A world‐wide assessment

P Lavelle, J Mathieu, A Spain, G Brown… - Global Ecology and …, 2022 - Wiley Online Library
Aim Macroinvertebrates comprise a highly diverse set of taxa with great potential as
indicators of soil quality. Communities were sampled at 3,694 sites distributed world‐wide …

Disentangling biotic interactions, environmental filters, and dispersal limitation as drivers of species co‐occurrence

M D'Amen, HK Mod, NJ Gotelli, A Guisan - Ecography, 2018 - Wiley Online Library
A key focus in ecology is to search for community assembly rules. Here we compare two
community modelling frameworks that integrate a combination of environmental and spatial …

Single cell spatial analysis reveals inflammatory foci of immature neutrophil and CD8 T cells in COVID-19 lungs

P Weeratunga, L Denney, JA Bull, E Repapi… - Nature …, 2023 - nature.com
Single cell spatial interrogation of the immune-structural interactions in COVID− 19 lungs is
challenging, mainly because of the marked cellular infiltrate and architecturally distorted …

Why we need sustainable networks bridging countries, disciplines, cultures and generations for aquatic biomonitoring 2.0: a perspective derived from the DNAqua-Net …

F Leese, A Bouchez, K Abarenkov, F Altermatt… - Advances in ecological …, 2018 - Elsevier
Aquatic biomonitoring has become an essential task in Europe and many other regions as a
consequence of strong anthropogenic pressures affecting the health of lakes, rivers, oceans …

Linking macroecology and community ecology: refining predictions of species distributions using biotic interaction networks

PPA Staniczenko, P Sivasubramaniam… - Ecology …, 2017 - Wiley Online Library
Macroecological models for predicting species distributions usually only include abiotic
environmental conditions as explanatory variables, despite knowledge from community …

Networks as tools for defining emergent properties of microbiomes and their stability

KT Kajihara, NA Hynson - Microbiome, 2024 - Springer
The potential promise of the microbiome to ameliorate a wide range of societal and
ecological challenges, from disease prevention and treatment to the restoration of entire …