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[HTML][HTML] Open and reproducible neuroimaging: from study inception to publication
Empirical observations of how labs conduct research indicate that the adoption rate of open
practices for transparent, reproducible, and collaborative science remains in its infancy. This …
practices for transparent, reproducible, and collaborative science remains in its infancy. This …
Open Science 2.0: Towards a truly collaborative research ecosystem
Conversations about open science have reached the mainstream, yet many open science
practices such as data sharing remain uncommon. Our efforts towards openness therefore …
practices such as data sharing remain uncommon. Our efforts towards openness therefore …
Analysis of task-based functional MRI data preprocessed with fMRIPrep
Functional magnetic resonance imaging (fMRI) is a standard tool to investigate the neural
correlates of cognition. fMRI noninvasively measures brain activity, allowing identification of …
correlates of cognition. fMRI noninvasively measures brain activity, allowing identification of …
Current challenges in translational and clinical fMRI and future directions
K Specht - Frontiers in psychiatry, 2020 - frontiersin.org
Translational neuroscience is an important field that brings together clinical praxis with
neuroscience methods. In this review article, the focus will be on functional neuroimaging …
neuroscience methods. In this review article, the focus will be on functional neuroimaging …
[HTML][HTML] Large, open datasets for human connectomics research: Considerations for reproducible and responsible data use
AR Laird - NeuroImage, 2021 - Elsevier
Large, open datasets have emerged as important resources in the field of human
connectomics. In this review, the evolution of data sharing involving magnetic resonance …
connectomics. In this review, the evolution of data sharing involving magnetic resonance …
A large public dataset of annotated clinical MRIs and metadata of patients with acute stroke
To extract meaningful and reproducible models of brain function from stroke images, for both
clinical and research proposes, is a daunting task severely hindered by the great variability …
clinical and research proposes, is a daunting task severely hindered by the great variability …
[HTML][HTML] Opportunities for increased reproducibility and replicability of developmental neuroimaging
Many workflows and tools that aim to increase the reproducibility and replicability of
research findings have been suggested. In this review, we discuss the opportunities that …
research findings have been suggested. In this review, we discuss the opportunities that …
The Aphasia Recovery Cohort, an open-source chronic stroke repository
Sharing neuroimaging datasets enables reproducibility, education, tool development, and
new discoveries. Neuroimaging from many studies are publicly available, providing a …
new discoveries. Neuroimaging from many studies are publicly available, providing a …
[HTML][HTML] Quantifying brain development in the HEALthy Brain and Child Development (HBCD) Study: The magnetic resonance imaging and spectroscopy protocol
Abstract The HEALthy Brain and Child Development (HBCD) Study, a multi-site prospective
longitudinal cohort study, will examine human brain, cognitive, behavioral, social, and …
longitudinal cohort study, will examine human brain, cognitive, behavioral, social, and …
Multisite test–retest reliability and compatibility of brain metrics derived from FreeSurfer versions 7.1, 6.0, and 5.3
Automatic neuroimaging processing tools provide convenient and systematic methods for
extracting features from brain magnetic resonance imaging scans. One tool, FreeSurfer …
extracting features from brain magnetic resonance imaging scans. One tool, FreeSurfer …