Generative adversarial networks in medical image augmentation: a review

Y Chen, XH Yang, Z Wei, AA Heidari, N Zheng… - Computers in Biology …, 2022 - Elsevier
Object With the development of deep learning, the number of training samples for medical
image-based diagnosis and treatment models is increasing. Generative Adversarial …

Transformer-based biomarker prediction from colorectal cancer histology: A large-scale multicentric study

SJ Wagner, D Reisenbüchler, NP West, JM Niehues… - Cancer Cell, 2023 - cell.com
Deep learning (DL) can accelerate the prediction of prognostic biomarkers from routine
pathology slides in colorectal cancer (CRC). However, current approaches rely on …

MemBrain v2: an end-to-end tool for the analysis of membranes in cryo-electron tomography

L Lamm, S Zufferey, RD Righetto, W Wietrzynski… - biorxiv, 2024 - biorxiv.org
MemBrain v2 is a deep learning-enabled program aimed at the efficient analysis of
membranes in cryo-electron tomography (cryo-ET). The final v2 release of MemBrain will …

[HTML][HTML] Built to last? Reproducibility and reusability of deep learning algorithms in computational pathology

SJ Wagner, C Matek, SS Boushehri, M Boxberg… - Modern Pathology, 2024 - Elsevier
Recent progress in computational pathology has been driven by deep learning. While code
and data availability are essential to reproduce findings from preceding publications …

Randstainna: Learning stain-agnostic features from histology slides by bridging stain augmentation and normalization

Y Shen, Y Luo, D Shen, J Ke - International Conference on Medical Image …, 2022 - Springer
Stain variations often decrease the generalization ability of deep learning based
approaches in digital histopathology analysis. Two separate proposals, namely stain …

The utility of color normalization for AI‐based diagnosis of hematoxylin and eosin‐stained pathology images

J Boschman, H Farahani, A Darbandsari… - The Journal of …, 2022 - Wiley Online Library
The color variation of hematoxylin and eosin (H&E)‐stained tissues has presented a
challenge for applications of artificial intelligence (AI) in digital pathology. Many color …

Maxstyle: Adversarial style composition for robust medical image segmentation

C Chen, Z Li, C Ouyang, M Sinclair, W Bai… - … Conference on Medical …, 2022 - Springer
Convolutional neural networks (CNNs) have achieved remarkable segmentation accuracy
on benchmark datasets where training and test sets are from the same domain, yet their …

Colour adaptive generative networks for stain normalisation of histopathology images

C Cong, S Liu, A Di Ieva, M Pagnucco… - Medical Image …, 2022 - Elsevier
Deep learning has shown its effectiveness in histopathology image analysis, such as
pathology detection and classification. However, stain colour variation in Hematoxylin and …

CS-CO: a hybrid self-supervised visual representation learning method for H&E-stained histopathological images

P Yang, X Yin, H Lu, Z Hu, X Zhang, R Jiang… - Medical image analysis, 2022 - Elsevier
Visual representation extraction is a fundamental problem in the field of computational
histopathology. Considering the powerful representation capacity of deep learning and the …

Domain generalization in computational pathology: Survey and guidelines

M Jahanifar, M Raza, K Xu, T Vuong… - arxiv preprint arxiv …, 2023 - arxiv.org
Deep learning models have exhibited exceptional effectiveness in Computational Pathology
(CPath) by tackling intricate tasks across an array of histology image analysis applications …