[BOOK][B] Biomass, biofuels, biochemicals: advances in enzyme technology
Biomass, Biofuels and Biochemicals: Advances in Enzyme Technology provides state-of-the-
art information on the fundamental aspects and current perspectives in enzyme technology …
art information on the fundamental aspects and current perspectives in enzyme technology …
VTR: a web tool for identifying analogous contacts on protein structures and their complexes
V Pimentel, D Mariano, LXS Cantão… - Frontiers in …, 2021 - frontiersin.org
Evolutionarily related proteins can present similar structures but very dissimilar sequences.
Hence, understanding the role of the inter-residues contacts for the protein structure has …
Hence, understanding the role of the inter-residues contacts for the protein structure has …
Isofunctional protein subfamily detection using data integration and spectral clustering
E Boari de Lima, W Meira… - PLoS computational …, 2016 - journals.plos.org
As increasingly more genomes are sequenced, the vast majority of proteins may only be
annotated computationally, given experimental investigation is extremely costly. This …
annotated computationally, given experimental investigation is extremely costly. This …
Annotation Vocabulary (Might Be) All You Need
Protein Language Models (pLMs) have revolutionized the computational modeling of protein
systems, building numerical embeddings that are centered around structural features. To …
systems, building numerical embeddings that are centered around structural features. To …
Computational resources and techniques in enzyme research
Heterogeneous and ever-expanding biological data requires proportional growth in both
computing power, as well as data storage, to collate, manage, analyze, and predict its …
computing power, as well as data storage, to collate, manage, analyze, and predict its …
Gremlin: A graph mining strategy to infer protein-ligand interaction patterns
Interactions between proteins and ligands are relevant in many biological processes. In the
last years, such interactions have gained even more attention as the comprehension of …
last years, such interactions have gained even more attention as the comprehension of …
Bioinformatics and Computational Biology Research at the Computer Science Department at UFMG
D Mariano, FC Carvalho, LL Bastos… - Journal of Information …, 2024 - sol.sbc.org.br
Bioinformatics is an emerging research field that encompasses the use of computational
methods, algorithms, and tools to solve life science problems. At the Laboratory of …
methods, algorithms, and tools to solve life science problems. At the Laboratory of …
VTR: an algorithm for identifying analogous contacts on protein structures and their complexes
V Pimentel, D Mariano, LXS Cantão, LL Bastos… - 2020 - researchsquare.com
Evolutionarily related proteins can present similar structures but very dissimilar sequences.
Hence, understanding the role of the inter-residues contacts for the protein structure has …
Hence, understanding the role of the inter-residues contacts for the protein structure has …
Revealing protein-ligand interaction patterns through frequent subgraph mining
Molecular recognition plays an important role in biological systems. In this article, the
authors are interested in receptor (protein) and ligand (non-protein) interactions what …
authors are interested in receptor (protein) and ligand (non-protein) interactions what …
A Hierarchical and Scalable Strategy for Protein Structural Classification
Protein function prediction is a relevant but challenging task as protein structural data is a
large and complex information. With the increase of biological data available there is a …
large and complex information. With the increase of biological data available there is a …