Whole genome sequencing (WGS) of foodborne pathogens has become an effective
method for investigating the information contained in the genome sequence of bacterial …

This multiagency report developed by the Interagency Collaboration for Genomics for Food
and Feed Safety provides an overview of the use of and transition to whole genome …

The routine use of genomics for disease surveillance provides the opportunity for high-
resolution bacterial epidemiology. Current whole-genome clustering and multilocus ty** …

We present the LiSEQ (Listeria SEQuencing) project, funded by the European Food Safety
Agency (EFSA) to compare Listeria monocytogenes isolates collected in the European …

Whole-genome sequencing (WGS) will soon replace traditional phenotypic methods for
routine testing of foodborne antimicrobial resistance (AMR). WGS is expected to improve …

To investigate the diversity, distribution, persistence, and prevalence of stress survival and
resistance genes of Listeria monocytogenes clones dominating in food processing …

Genomic bacterial strain ty** has facilitated a paradigm shift in clinical and molecular
epidemiology. The increased resolution that these new techniques provide, along with …

Listeria monocytogenes is a major human foodborne pathogen that is prevalent in the
natural environment and has a high case fatality rate. Whole genome sequencing (WGS) …

In this work we compared the most frequently used Klebsiella pneumoniae ty** methods:
PFGE, cgMLST and coreSNP. We evaluated the discriminatory power of the three methods …

The use of whole-genome sequencing (WGS) using next-generation sequencing (NGS)
technology has become a widely accepted method for microbiology laboratories in the …