Distinct systemic and mucosal immune responses during acute SARS-CoV-2 infection

N Smith, P Goncalves, B Charbit, L Grzelak… - Nature …, 2021 - nature.com
Coordinated local mucosal and systemic immune responses following severe acute
respiratory syndrome coronavirus 2 (SARS-CoV-2) infection either protect against …

[HTML][HTML] Field response of N2O emissions, microbial communities, soil biochemical processes and winter barley growth to the addition of conventional and …

LM Greenfield, M Graf, S Rengaraj, R Bargiela… - Agriculture, Ecosystems …, 2022 - Elsevier
Microplastic contamination in agroecosystems is becoming more prevalent due to the direct
use of plastics in agriculture (eg, mulch films) and via contamination of amendments (eg …

Impact of the gut microbiota on the m6A epitranscriptome of mouse cecum and liver

S Jabs, A Biton, C Bécavin, MA Nahori… - Nature …, 2020 - nature.com
The intestinal microbiota modulates host physiology and gene expression via mechanisms
that are not fully understood. Here we examine whether host epitranscriptomic marks are …

[HTML][HTML] Increasing concentration of pure micro-and macro-LDPE and PP plastic negatively affect crop biomass, nutrient cycling, and microbial biomass

M Graf, LM Greenfield, MK Reay, R Bargiela… - Journal of hazardous …, 2023 - Elsevier
Over the last 50 years, the intense use of agricultural plastic in the form of mulch films has
led to an accumulation of plastic in soil, creating a legacy of plastic in agricultural fields …

Unveiling Candida albicans intestinal carriage in healthy volunteers: the role of micro- and mycobiota, diet, host genetics and immune response

M Delavy, N Sertour, E Patin, E Le Chatelier, N Cole… - Gut …, 2023 - Taylor & Francis
Candida albicans is a commensal yeast present in the gut of most healthy individuals but
with highly variable concentrations. However, little is known about the host factors that …

Characterization of biliary microbiota dysbiosis in extrahepatic cholangiocarcinoma

M Saab, D Mestivier, M Sohrabi, C Rodriguez… - PLoS …, 2021 - journals.plos.org
Extrahepatic cholangiocarcinoma (CCA) accounts for 3% of digestive cancers. The role of
biliary microbiota as an environment-related modulator has been scarcely investigated in …

PGPg_finder: a comprehensive and user-friendly pipeline for identifying plant growth-promoting genes in genomic and metagenomic data

TA Pellegrinetti, GGTN Monteiro, LN Lemos… - Rhizosphere, 2024 - Elsevier
Identifying and comparing plant growth-promoting traits (PGPT) within whole-genome and
metagenomic sequencing data can significantly advance agricultural research and promote …

A Review of web-based metagenomics platforms for analysing next-generation sequence data

AB Achudhan, P Kannan, A Gupta, LM Saleena - Biochemical Genetics, 2024 - Springer
Metagenomics has now evolved as a promising technology for understanding the microbial
population in the environment. By metagenomics, a number of extreme and complex …

Mining zebrafish microbiota reveals key community-level resistance against fish pathogen infection

FA Stressmann, J Bernal-Bayard… - The ISME …, 2021 - academic.oup.com
The long-known resistance to pathogens provided by host-associated microbiota fostered
the notion that adding protective bacteria could prevent or attenuate infection. However, the …