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Quantum chemistry calculations for metabolomics: Focus review
A primary goal of metabolomics studies is to fully characterize the small-molecule
composition of complex biological and environmental samples. However, despite advances …
composition of complex biological and environmental samples. However, despite advances …
Universal QM/MM approaches for general nanoscale applications
Quantum mechanics/molecular mechanics (QM/MM) hybrid models allow one to address
chemical phenomena in complex molecular environments. Whereas this modeling approach …
chemical phenomena in complex molecular environments. Whereas this modeling approach …
Chemoton 2.0: autonomous exploration of chemical reaction networks
Fueled by advances in hardware and algorithm design, large-scale automated explorations
of chemical reaction space have become possible. Here, we present our approach to an …
of chemical reaction space have become possible. Here, we present our approach to an …
AutoMeKin2021: An open‐source program for automated reaction discovery
AutoMeKin2021 is an updated version of tsscds2018, a program for the automated
discovery of reaction mechanisms (J. Comput. Chem. 2018, 39, 1922). This release features …
discovery of reaction mechanisms (J. Comput. Chem. 2018, 39, 1922). This release features …
Autonomous reaction network exploration in homogeneous and heterogeneous catalysis
Autonomous computations that rely on automated reaction network elucidation algorithms
may pave the way to make computational catalysis on a par with experimental research in …
may pave the way to make computational catalysis on a par with experimental research in …
Expansive quantum mechanical exploration of chemical reaction paths
Conspectus Quantum mechanical methods have been well-established for the elucidation of
reaction paths of chemical processes and for the explicit dynamics of molecular systems …
reaction paths of chemical processes and for the explicit dynamics of molecular systems …
A map of mass spectrometry-based in silico fragmentation prediction and compound identification in metabolomics
Metabolomics, the comprehensive study of the metabolome, and lipidomics—the large-scale
study of pathways and networks of cellular lipids—are major driving forces in enabling …
study of pathways and networks of cellular lipids—are major driving forces in enabling …
Molecule‐Specific Uncertainty Quantification in Quantum Chemical Studies
M Reiher - Israel Journal of Chemistry, 2022 - Wiley Online Library
Solving the electronic Schrödinger equation for changing nuclear coordinates provides
access to the Born‐Oppenheimer potential energy surface. This surface is the key starting …
access to the Born‐Oppenheimer potential energy surface. This surface is the key starting …
[HTML][HTML] SCINE—Software for chemical interaction networks
The software for chemical interaction networks (SCINE) project aims at pushing the frontier
of quantum chemical calculations on molecular structures to a new level. While calculations …
of quantum chemical calculations on molecular structures to a new level. While calculations …
New tools for taming complex reaction networks: the unimolecular decomposition of indole revisited
The level of detail attained in the computational description of reaction mechanisms can be
vastly improved through tools for automated chemical space exploration, particularly for …
vastly improved through tools for automated chemical space exploration, particularly for …