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Viruses of archaea: structural, functional, environmental and evolutionary genomics
Viruses of archaea represent one of the most enigmatic parts of the virosphere. Most of the
characterized archaeal viruses infect extremophilic hosts and display remarkable diversity of …
characterized archaeal viruses infect extremophilic hosts and display remarkable diversity of …
What makes a megaplasmid?
Naturally occurring plasmids come in different sizes. The smallest are less than a kilobase of
DNA, while the largest can be over three orders of magnitude larger. Historically, research …
DNA, while the largest can be over three orders of magnitude larger. Historically, research …
Multiple origins of prokaryotic and eukaryotic single-stranded DNA viruses from bacterial and archaeal plasmids
Single-stranded (ss) DNA viruses are a major component of the earth virome. In particular,
the circular, Rep-encoding ssDNA (CRESS-DNA) viruses show high diversity and …
the circular, Rep-encoding ssDNA (CRESS-DNA) viruses show high diversity and …
The universal tree of life: an update
P Forterre - Frontiers in microbiology, 2015 - frontiersin.org
Biologists used to draw schematic “universal” trees of life as metaphors illustrating the
history of life. It is indeed a priori possible to construct an organismal tree connecting the …
history of life. It is indeed a priori possible to construct an organismal tree connecting the …
A plasmid from an Antarctic haloarchaeon uses specialized membrane vesicles to disseminate and infect plasmid-free cells
The major difference between viruses and plasmids is the mechanism of transferring their
genomic information between host cells. Here, we describe the archaeal plasmid pR1SE …
genomic information between host cells. Here, we describe the archaeal plasmid pR1SE …
Three-dimensional graphene aerogel mitigated the toxic impact of chloramphenicol wastewater on microorganisms in an EGSB reactor
Y Song, Z Zhang, Y Fang, M Sun, Y Jiang, D Li… - Science of The Total …, 2023 - Elsevier
Anaerobic treatment of chloramphenicol wastewater holds significant promise due to its
potential for bioenergy generation. However, the high concentration of organic matter and …
potential for bioenergy generation. However, the high concentration of organic matter and …
Genomes of abundant and widespread viruses from the deep ocean
The deep sea is a massive, largely oligotrophic ecosystem, stretched over nearly 65% of the
planet's surface. Deep-sea planktonic communities are almost completely dependent upon …
planet's surface. Deep-sea planktonic communities are almost completely dependent upon …
Viral origin of eukaryotic type IIA DNA topoisomerases
Type II DNA topoisomerases of the family A (Topo IIAs) are present in all Bacteria (DNA
gyrase) and eukaryotes. In eukaryotes, they play a major role in transcription, DNA …
gyrase) and eukaryotes. In eukaryotes, they play a major role in transcription, DNA …
[PDF][PDF] Expanded dataset reveals the emergence and evolution of DNA gyrase in archaea
DNA gyrase is a type II topoisomerase with the unique capacity to introduce negative
supercoiling in DNA. In bacteria, DNA gyrase has an essential role in the homeostatic …
supercoiling in DNA. In bacteria, DNA gyrase has an essential role in the homeostatic …
Towards functional characterization of archaeal genomic dark matter
A substantial fraction of archaeal genes, from∼ 30% to as much as 80%, encode
'hypothetical'proteins or genomic 'dark matter'. Archaeal genomes typically contain a higher …
'hypothetical'proteins or genomic 'dark matter'. Archaeal genomes typically contain a higher …