Overlooked pathways of endogenous simultaneous nitrification and denitrification in anaerobic/aerobic/anoxic sequencing batch reactors with organic …

S Shi, X He, L He, X Fan, B Shu, J Zhou, Q He - Water Research, 2023 - Elsevier
The anaerobic/aerobic/anoxic (A/O/A) process is a promising biotechnology to intensify
denitrification in low carbon/nitrogen (C/N) wastewater treatment, but the neglected typical …

Ammonia monooxygenase-mediated cometabolic biotransformation of volatile 4-chlorophenol in nitrifying counter-diffused biofilms: A combined molecular dynamics …

P Zheng, W Li, Y Li, Y Cheng, J Wang, Y Mu, J Shen - Water Research, 2024 - Elsevier
Ammonia monooxygenase (AMO)-mediated cometabolism of organic pollutants has been
widely observed in biological nitrogen removal process. However, its molecular mechanism …

Phylogenetics and environmental distribution of nitric oxide-forming nitrite reductases reveal their distinct functional and ecological roles

G Pold, G Bonilla-Rosso, A Saghaï… - ISME …, 2024 - academic.oup.com
The two evolutionarily unrelated nitric oxide-producing nitrite reductases, NirK and NirS, are
best known for their redundant role in denitrification. They are also often found in organisms …

Unexpected complexity of the ammonia monooxygenase in archaea

LH Hodgskiss, M Melcher, M Kerou, W Chen… - The ISME …, 2023 - academic.oup.com
Ammonia oxidation, as the first step of nitrification, constitutes a critical process in the global
nitrogen cycle. However, fundamental knowledge of its key enzyme, the copper-dependent …

Metagenomic exploration of the rhizosphere soil microbial community and their significance in facilitating the development of wild-simulated ginseng

J Huang, Y Wu, Q Gao, X Li, Y Zeng… - Applied and …, 2024 - journals.asm.org
Panax ginseng, a prized medicinal herb, has faced increasingly challenging field production
due to soil degradation and fungal diseases in Northeast China. Wild-simulated cultivation …

Phylogenetic and Functional Diversity of Soluble Di‐Iron Monooxygenases

SNN Yang, MA Kertesz… - Environmental …, 2025 - Wiley Online Library
Monooxygenase (MO) enzymes are responsible for the oxidation of hydrocarbons and other
compounds in the carbon and nitrogen cycles, are important for the biodegradation of …

Seasonality and longer-term development generate temporal dynamics in the Populus microbiome

WA Argiroff, AA Carrell, DM Klingeman, NC Dove… - Msystems, 2024 - journals.asm.org
Temporal variation in community composition is central to our understanding of the
assembly and functioning of microbial communities, yet the controls over temporal dynamics …

Organic substitution stimulates ammonia oxidation-driven N2O emissions by distinctively enriching keystone species of ammonia-oxidizing archaea and bacteria in …

Q Zhang, M Chen, Y Leng, X Wang, Y Fu… - Science of The Total …, 2023 - Elsevier
Partial organic substitution (POS) is pivotal in enhancing soil productivity and changing
nitrous oxide (N 2 O) emissions by profoundly altering soil nitrogen (N) cycling, where …

Effects of coal-fired power plants on soil microbial diversity and community structures

B Sun, R Zhu, Y Shi, W Zhang, Z Zhou, D Ma… - Journal of …, 2024 - Elsevier
Long-term deposition of atmospheric pollutants emitted from coal combustion and their
effects on the eco-environment have been extensively studied around coal-fired power …

Variable impact of geochemical gradients on the functional potential of bacteria, archaea, and phages from the permanently stratified Lac Pavin

AL Jaffe, C Bardot, AH Le Jeune, J Liu, J Colombet… - Microbiome, 2023 - Springer
Background Permanently stratified lakes contain diverse microbial communities that vary
with depth and so serve as useful models for studying the relationships between microbial …