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Towards a comprehensive catalogue of validated and target-linked human enhancers
The human gene catalogue is essentially complete, but we lack an equivalently vetted
inventory of bona fide human enhancers. Hundreds of thousands of candidate enhancers …
inventory of bona fide human enhancers. Hundreds of thousands of candidate enhancers …
Enhancer redundancy in development and disease
Shadow enhancers are seemingly redundant transcriptional cis-regulatory elements that
regulate the same gene and drive overlap** expression patterns. Recent studies have …
regulate the same gene and drive overlap** expression patterns. Recent studies have …
Discovery of target genes and pathways at GWAS loci by pooled single-cell CRISPR screens
Most variants associated with complex traits and diseases identified by genome-wide
association studies (GWAS) map to noncoding regions of the genome with unknown effects …
association studies (GWAS) map to noncoding regions of the genome with unknown effects …
Human gene essentiality
A gene can be defined as essential when loss of its function compromises viability of the
individual (for example, embryonic lethality) or results in profound loss of fitness. At the …
individual (for example, embryonic lethality) or results in profound loss of fitness. At the …
CRISPR/dCas9 tools: epigenetic mechanism and application in gene transcriptional regulation
R Cai, R Lv, X Shi, G Yang, J ** - International journal of molecular …, 2023 - mdpi.com
CRISPR/Cas9-mediated cleavage of DNA, which depends on the endonuclease activity of
Cas9, has been widely used for gene editing due to its excellent programmability and …
Cas9, has been widely used for gene editing due to its excellent programmability and …
Quantifying the regulatory effect size of cis-acting genetic variation using allelic fold change
Map** cis-acting expression quantitative trait loci (cis-eQTL) has become a popular
approach for characterizing proximal genetic regulatory variants. In this paper, we describe …
approach for characterizing proximal genetic regulatory variants. In this paper, we describe …
[HTML][HTML] Advancements in CRISPR screens for the development of cancer immunotherapy strategies
CRISPR screen technology enables systematic and scalable interrogation of gene function
by using the CRISPR-Cas9 system to perturb gene expression. In the field of cancer …
by using the CRISPR-Cas9 system to perturb gene expression. In the field of cancer …
A high-resolution genome-wide CRISPR/Cas9 viability screen reveals structural features and contextual diversity of the human cell-essential proteome
T Bertomeu, J Coulombe-Huntington… - … and cellular biology, 2018 - Taylor & Francis
To interrogate genes essential for cell growth, proliferation and survival in human cells, we
carried out a genome-wide clustered regularly interspaced short palindromic repeat …
carried out a genome-wide clustered regularly interspaced short palindromic repeat …
Enhancer transcription detected in the nascent transcriptomic landscape of bread wheat
The precise spatiotemporal gene expression is orchestrated by enhancers that lack general
sequence features and thus are difficult to be computationally identified. By nascent RNA …
sequence features and thus are difficult to be computationally identified. By nascent RNA …
Molecular radiation biology
Various exogeneous and endogenous factors constantly cause damages in the
biomolecules within a cell. For example, per day, 10,000–100,000 molecular lesions occur …
biomolecules within a cell. For example, per day, 10,000–100,000 molecular lesions occur …