A review of integrated analysis in fisheries stock assessment

MN Maunder, AE Punt - Fisheries research, 2013 - Elsevier
Limited data, and the requirement to provide science-based advice for exploited
populations, have led to the development of statistical methods that combine several …

Modelling and forecasting stock–recruitment: current and future perspectives

S Subbey, JA Devine, U Schaarschmidt… - ICES Journal of …, 2014 - academic.oup.com
This paper presents a brief review of the present state of knowledge in stock–recruitment
forecasting, including process and current methodological challenges to predicting stock …

Those who fail to learn from history are condemned to repeat it: A perspective on current stock assessment good practices and the consequences of not following them

AE Punt - Fisheries Research, 2023 - Elsevier
The ideal stock assessment would be able to estimate all of the key parameters related to
population processes within a framework that assigns appropriate weight to the data, fits the …

Contemporary fisheries stock assessment: many issues still remain

MN Maunder, KR Piner - ICES Journal of Marine Science, 2015 - academic.oup.com
Abstract Interpretation of data used in fisheries assessment and management requires
knowledge of population (eg growth, natural mortality, and recruitment), fisheries (eg …

Essential features of the next-generation integrated fisheries stock assessment package: a perspective

AE Punt, A Dunn, BÞ Elvarsson, J Hampton, SD Hoyle… - Fisheries …, 2020 - Elsevier
Integrated analysis (or integrated population modelling) methods have become the
preferred approach for conducting stock assessments, and providing the basis for …

Adjusting for bias due to variability of estimated recruitments in fishery assessment models

RD Methot Jr, IG Taylor - Canadian Journal of Fisheries and …, 2011 - cdnsciencepub.com
Integrated analysis models provide a tool to estimate fish abundance, recruitment, and
fishing mortality from a wide variety of data. The flexibility of integrated analysis models …

A state-space approach to incorporating environmental effects on recruitment in an age-structured assessment model with an application to southern New England …

TJ Miller, JA Hare, LA Alade - Canadian Journal of Fisheries …, 2016 - cdnsciencepub.com
The state-space model framework provides a natural, probabilistic approach to stock
assessment by modeling the stochastic nature of population survival and recruitment …

Modeling temporal variation in recruitment in fisheries stock assessment: a review of theory and practice

MN Maunder, JT Thorson - Fisheries Research, 2019 - Elsevier
Recruitment is one of the most variable biological processes driving fisheries population
dynamics and the characteristics and drivers of the variation differ among stocks …

Dealing with data conflicts in statistical inference of population assessment models that integrate information from multiple diverse data sets

MN Maunder, KR Piner - Fisheries Research, 2017 - Elsevier
Contemporary fisheries stock assessments often use multiple diverse data sets to extract as
much information as possible about biological and fishery processes. However, models are …

[PDF][PDF] User manual for stock synthesis

RD Methot - NOAA Fisheries, Seattle, USA, 2009 - sedarweb.org
This manual provides a guide for using the stock assessment program, Stock Synthesis
(SS). The guide contains a description of the input and output files and usage instructions. A …