Everyman's guide to bacterial insertion sequences

P Siguier, E Gourbeyre, A Varani, B Ton-Hoang… - Mobile DNA …, 2015 - Wiley Online Library
We have divided this review into two major sections. In one, we have attempted to present
an overview of our current understanding of prokaryotic insertion sequences (IS), their …

Genome sequence and functional genomic analysis of the oil-degrading bacterium Oleispira antarctica

M Kube, TN Chernikova, Y Al-Ramahi… - Nature …, 2013 - nature.com
Ubiquitous bacteria from the genus Oleispira drive oil degradation in the largest
environment on Earth, the cold and deep sea. Here we report the genome sequence of …

An analysis of the IS6/IS26 family of insertion sequences: is it a single family?

CJ Harmer, RM Hall - Microbial genomics, 2019 - microbiologyresearch.org
The relationships within a curated set of 112 insertion sequences (ISs) currently assigned to
the IS 6 family, here re-named the IS 6/IS 26 family, in the ISFinder database were …

A multiresistance megaplasmid pLG1 bearing a hylEfm genomic island in hospital Enterococcus faecium isolates

JAL Gomez, W Van Schaik, AR Freitas… - International Journal of …, 2011 - Elsevier
Enterococcus faecium is considered to be a nosocomial pathogen with increasing medical
importance. The putative virulence factor, hylEfm, encoding a putative hyaluronidase, is …

[PDF][PDF] Physiological and molecular basis of extreme radioresistance in Deinococcus radiodurans

HS Misra, YS Rajpurohit, S Kota - Current Science(Bangalore), 2013 - researchgate.net
Deinococcus radiodurans is characterized for its extraordinary radioresistance. An efficient
DNA strandbreak repair and strong oxidative stress tolerance are amongst the mechanisms …

Tn6167, an antibiotic resistance island in an Australian carbapenem-resistant Acinetobacter baumannii GC2, ST92 isolate

SJ Nigro, RM Hall - Journal of antimicrobial chemotherapy, 2012 - academic.oup.com
Objectives To determine the context and location of the bla OXA-23 carbapenem-resistance
gene and the structure of the resistance island in the chromosomal comM gene in a …

Comparative Profiling of Pseudomonas aeruginosa Strains Reveals Differential Expression of Novel Unique and Conserved Small RNAs

S Ferrara, M Brugnoli, A De Bonis, F Righetti… - PloS one, 2012 - journals.plos.org
Pseudomonas aeruginosa is a highly adaptable bacterium that thrives in a broad range of
ecological niches and can infect multiple hosts as diverse as plants, nematodes and …

Structural insights into the mechanism of double strand break formation by Hermes, a hAT family eukaryotic DNA transposase

AB Hickman, AR Voth, H Ewis, X Li… - Nucleic acids …, 2018 - academic.oup.com
Some DNA transposons relocate from one genomic location to another using a mechanism
that involves generating double-strand breaks at their transposon ends by forming hairpins …

[HTML][HTML] Large-scale analysis of predicted phages in 1497 Lactiplantibacillus plantarum strains-Unveiling the functional diversity and conservation of prophage …

R Lv, W Ma, R Liu, Y Chen, L Wang, X Chen - LWT, 2025 - Elsevier
Lactiplantibacillus plantarum, a widely distributed potential probiotic. Its ecological
adaptability is affected by mobile genetic elements, with prophages being crucial. This first …

Characterization of new bacterial catabolic genes and mobile genetic elements by high throughput genetic screening of a soil metagenomic library

S Jacquiod, S Demanèche, L Franqueville… - Journal of …, 2014 - Elsevier
A mix of oligonucleotide probes was used to hybridize soil metagenomic DNA from a fosmid
clone library spotted on high density membranes. The pooled radio-labeled probes were …