The construction of evolutionary trees is now a standard part of exploratory sequence
analysis. Bayesian methods for estimating trees have recently been proposed as a faster …

The evolution of dengue viruses has had a major impact on their virulence for humans and
on the epidemiology of dengue disease around the world. Although antigenic and genetic …

Phylogenetic inference and evaluating support for inferred relationships is at the core of
many studies testing evolutionary hypotheses. Despite the popularity of nonparametric …

PhyML is a phylogeny software based on the maximum-likelihood principle. Early PhyML
versions used a fast algorithm performing nearest neighbor interchanges to improve a …

The increase in the number of large data sets and the complexity of current probabilistic
sequence evolution models necessitates fast and reliable phylogeny reconstruction …

The field of molecular evolution has experienced explosive growth in recent years due to the
rapid accumulation of genetic sequence data, continuous improvements to computer …

Motivation: The computation of large phylogenetic trees with statistical models such as
maximum likelihood or bayesian inference is computationally extremely intensive. It has …

PHYML Online is a web interface to PHYML, a software that implements a fast and accurate
heuristic for estimating maximum likelihood phylogenies from DNA and protein sequences …

Appropriate and extensive taxon sampling is one of the most important determinants of
accurate phylogenetic estimation. In addition, accuracy of inferences about evolutionary …

In the last few decades, evolutionary algorithms have emerged as a revolutionary approach
for solving search and optimization problems involving multiple conflicting objectives …