CHARMM at 45: Enhancements in accessibility, functionality, and speed
Since its inception nearly a half century ago, CHARMM has been playing a central role in
computational biochemistry and biophysics. Commensurate with the developments in …
computational biochemistry and biophysics. Commensurate with the developments in …
Neural network potentials for chemistry: concepts, applications and prospects
Artificial Neural Networks (NN) are already heavily involved in methods and applications for
frequent tasks in the field of computational chemistry such as representation of potential …
frequent tasks in the field of computational chemistry such as representation of potential …
High-dimensional neural network potentials for accurate vibrational frequencies: the formic acid dimer benchmark
DS Rasheeda, AM Santa Daría, B Schröder… - Physical Chemistry …, 2022 - pubs.rsc.org
In recent years, machine learning potentials (MLP) for atomistic simulations have attracted a
lot of attention in chemistry and materials science. Many new approaches have been …
lot of attention in chemistry and materials science. Many new approaches have been …
Transfer learning for affordable and high-quality tunneling splittings from instanton calculations
S Käser, JO Richardson… - Journal of Chemical Theory …, 2022 - ACS Publications
The combination of transfer learning (TL) a low-level potential energy surface (PES) to a
higher level of electronic structure theory together with ring-polymer instanton (RPI) theory is …
higher level of electronic structure theory together with ring-polymer instanton (RPI) theory is …
From the Automated Calculation of Potential Energy Surfaces to Accurate Infrared Spectra
B Schröder, G Rauhut - The Journal of Physical Chemistry …, 2024 - ACS Publications
Advances in the development of quantum chemical methods and progress in multicore
architectures in computer science made the simulation of infrared spectra of isolated …
architectures in computer science made the simulation of infrared spectra of isolated …
Transfer-learned potential energy surfaces: Toward microsecond-scale molecular dynamics simulations in the gas phase at CCSD (T) quality
The rise of machine learning has greatly influenced the field of computational chemistry and
atomistic molecular dynamics simulations in particular. One of its most exciting prospects is …
atomistic molecular dynamics simulations in particular. One of its most exciting prospects is …
[HTML][HTML] Asparagus: A toolkit for autonomous, user-guided construction of machine-learned potential energy surfaces
With the establishment of machine learning (ML) techniques in the scientific community, the
construction of ML potential energy surfaces (ML-PES) has become a standard process in …
construction of ML potential energy surfaces (ML-PES) has become a standard process in …
[HTML][HTML] PhysNet meets CHARMM: A framework for routine machine learning/molecular mechanics simulations
Full-dimensional potential energy surfaces (PESs) based on machine learning (ML)
techniques provide a means for accurate and efficient molecular simulations in the gas and …
techniques provide a means for accurate and efficient molecular simulations in the gas and …
Atomistic Simulations for Reactions and Vibrational Spectroscopy in the Era of Machine Learning─Quo Vadis?
M Meuwly - The Journal of Physical Chemistry B, 2022 - ACS Publications
Atomistic simulations using accurate energy functions can provide molecular-level insight
into functional motions of molecules in the gas and in the condensed phase. This …
into functional motions of molecules in the gas and in the condensed phase. This …
An Ab Initio Neural Network Potential Energy Surface for the Dimer of Formic Acid and Further Quantum Tunneling Dynamics
F Li, X Yang, X Liu, J Cao, W Bian - ACS omega, 2023 - ACS Publications
We construct a full-dimensional ab initio neural network potential energy surface (PES) for
the isomerization system of the formic acid dimer (FAD). This is based upon ab initio …
the isomerization system of the formic acid dimer (FAD). This is based upon ab initio …