The use of DNA barcodes in food web construction—terrestrial and aquatic ecologists unite!

T Roslin, S Majaneva - Genome, 2016 - cdnsciencepub.com
By depicting who eats whom, food webs offer descriptions of how grou**s in nature
(typically species or populations) are linked to each other. For asking questions on how food …

A new versatile primer set targeting a short fragment of the mitochondrial COI region for metabarcoding metazoan diversity: application for characterizing coral reef fish …

M Leray, JY Yang, CP Meyer, SC Mills, N Agudelo… - Frontiers in …, 2013 - Springer
Introduction The PCR-based analysis of homologous genes has become one of the most
powerful approaches for species detection and identification, particularly with the recent …

Towards more compassionate wildlife research through the 3Rs principles: Moving from invasive to non‐invasive methods

MA Zemanova - Wildlife Biology, 2020 - Wiley Online Library
Research in ecology and wildlife biology remains crucial for increasing our knowledge and
improving species management and conservation in the midst of the current biodiversity …

Empirically characterising trophic networks: what emerging DNA-based methods, stable isotope and fatty acid analyses can offer

M Traugott, S Kamenova, L Ruess, J Seeber… - Advances in ecological …, 2013 - Elsevier
Food webs in agricultural systems are complex and trophic linkages are difficult to track
using conventional methodologies. Here, we review three alternative approaches that allow …

Optimised scat collection protocols for dietary DNA metabarcoding in vertebrates

JC McInnes, R Alderman, BE Deagle… - Methods in Ecology …, 2017 - Wiley Online Library
DNA metabarcoding of food in animal scats provides a non‐invasive dietary analysis
method for vertebrates. A variety of molecular approaches can be used to recover dietary …

A pragmatic approach to the analysis of diets of generalist predators: The use of next‐generation sequencing with no blocking probes

J Piñol, V San Andrés, EL Clare, G Mir… - Molecular ecology …, 2014 - Wiley Online Library
Predicting whether a predator is capable of affecting the dynamics of a prey species in the
field implies the analysis of the complete diet of the predator, not simply rates of predation on …

Nanopore short‐read sequencing: A quick, cost‐effective and accurate method for DNA metabarcoding

AL van der Reis, LE Beckley, MP Olivar… - Environmental …, 2023 - Wiley Online Library
Dietary and predator–prey studies are more frequently relying on DNA metabarcoding
methods, typically achieving results that have a better taxonomic resolution (eg, species …

Adélie penguin population diet monitoring by analysis of food DNA in scats

SN Jarman, JC McInnes, C Faux, AM Polanowski… - PLoS …, 2013 - journals.plos.org
The Adélie penguin is the most important animal currently used for ecosystem monitoring in
the Southern Ocean. The diet of this species is generally studied by visual analysis of …

Global systematic review of methodological approaches to analyze coastal shelf food webs

E Kytinou, M Sini, Y Issaris… - Frontiers in Marine …, 2020 - frontiersin.org
The study of marine coastal food webs has a central role in the application of the integrated
ecosystem approach for marine management. Changes in food webs caused by natural or …

Multi-locus DNA metabarcoding of zooplankton communities and scat reveal trophic interactions of a generalist predator

EL Carroll, R Gallego, MA Sewell, J Zeldis… - Scientific Reports, 2019 - nature.com
To understand the ecosystem dynamics that underpin the year-round presence of a large
generalist consumer, the Bryde's whale (Balaenoptera edeni brydei), we use a DNA …