Genomics and pathotypes of the many faces of Escherichia coli
J Geurtsen, M de Been, E Weerdenburg… - FEMS microbiology …, 2022 - academic.oup.com
Escherichia coli is the most researched microbial organism in the world. Its varied impact on
human health, consisting of commensalism, gastrointestinal disease, or extraintestinal …
human health, consisting of commensalism, gastrointestinal disease, or extraintestinal …
[HTML][HTML] Pseudomonas aeruginosa: an antibiotic resilient pathogen with environmental origin
Highlights•P. aeruginosa is opportunistic pathogen with an environmental origin.•P.
aeruginosa presents low susceptibility to currently used antibiotics.•P. aeruginosa displays a …
aeruginosa presents low susceptibility to currently used antibiotics.•P. aeruginosa displays a …
Population genomics of Escherichia coli in livestock-kee** households across a rapidly develo** urban landscape
Quantitative evidence for the risk of zoonoses and the spread of antimicrobial resistance
remains lacking. Here, as part of the UrbanZoo project, we sampled Escherichia coli from …
remains lacking. Here, as part of the UrbanZoo project, we sampled Escherichia coli from …
Next-generation microbiology: from comparative genomics to gene function
Microbiology is at a turning point in its 120-year history. Widespread next-generation
sequencing has revealed genetic complexity among bacteria that could hardly have been …
sequencing has revealed genetic complexity among bacteria that could hardly have been …
The Avian Pathogenic Escherichia coli (APEC) pathotype is comprised of multiple distinct, independent genotypes
ABSTRACT Avian Pathogenic E. coli (APEC) is the causative agent of avian colibacillosis,
resulting in economic losses to the poultry industry through morbidity, mortality and carcass …
resulting in economic losses to the poultry industry through morbidity, mortality and carcass …
Genome wide association study of Escherichia coli bloodstream infection isolates identifies genetic determinants for the portal of entry but not fatal outcome
Escherichia coli is an important cause of bloodstream infections (BSI), which is of concern
given its high mortality and increasing worldwide prevalence. Finding bacterial genetic …
given its high mortality and increasing worldwide prevalence. Finding bacterial genetic …
Differential stress responsiveness determines intraspecies virulence heterogeneity and host adaptation in Listeria monocytogenes
Microbial pathogenesis is mediated by the expression of virulence genes. However, as
microbes with identical virulence gene content can differ in their pathogenic potential, other …
microbes with identical virulence gene content can differ in their pathogenic potential, other …
Functions predict horizontal gene transfer and the emergence of antibiotic resistance
Phylogenetic distance, shared ecology, and genomic constraints are often cited as key
drivers governing horizontal gene transfer (HGT), although their relative contributions are …
drivers governing horizontal gene transfer (HGT), although their relative contributions are …
[HTML][HTML] Genomic characteristics, virulence, and antimicrobial resistance in avian pathogenic Escherichia coli MTR_BAU02 strain isolated from layer farm in …
Background Colibacillosis, caused by avian pathogenic Escherichia coli (APEC), is one of
the most significant infectious diseases affecting poultry worldwide. Objectives This study …
the most significant infectious diseases affecting poultry worldwide. Objectives This study …
Combined comparative genomics and clinical modeling reveals plasmid-encoded genes are independently associated with Klebsiella infection
Members of the Klebsiella pneumoniae species complex frequently colonize the gut and
colonization is associated with subsequent infection. To identify genes associated with …
colonization is associated with subsequent infection. To identify genes associated with …