Association map**: critical considerations shift from genoty** to experimental design

S Myles, J Peiffer, PJ Brown, ES Ersoz, Z Zhang… - The Plant …, 2009 - academic.oup.com
The goal of many plant scientists' research is to explain natural phenotypic variation in terms
of simple changes in DNA sequence. Traditionally, linkage map** has been the most …

Crop genomics: advances and applications

PL Morrell, ES Buckler, J Ross-Ibarra - Nature Reviews Genetics, 2012 - nature.com
The completion of reference genome sequences for many important crops and the ability to
perform high-throughput resequencing are providing opportunities for improving our …

Population genomic and genome-wide association studies of agroclimatic traits in sorghum

GP Morris, P Ramu, SP Deshpande… - Proceedings of the …, 2013 - National Acad Sciences
Accelerating crop improvement in sorghum, a staple food for people in semiarid regions
across the develo** world, is key to ensuring global food security in the context of climate …

The genetic architecture of maize flowering time

ES Buckler, JB Holland, PJ Bradbury, CB Acharya… - Science, 2009 - science.org
Flowering time is a complex trait that controls adaptation of plants to their local environment
in the outcrossing species Zea mays (maize). We dissected variation for flowering time with …

The genetic architecture of maize height

JA Peiffer, MC Romay, MA Gore, SA Flint-Garcia… - Genetics, 2014 - academic.oup.com
Height is one of the most heritable and easily measured traits in maize (Zea mays L.). Given
a pedigree or estimates of the genomic identity-by-state among related plants, height is also …

QTL analyses: power, precision, and accuracy

WD Beavis - Molecular dissection of complex traits, 2019 - taylorfrancis.com
The development of ubiquitous polymorphic genetic markers that span the genome have
made it possible for quantitative and molecular geneticists to investigate what MD Edwards …

Conserved noncoding genomic sequences associated with a flowering-time quantitative trait locus in maize

S Salvi, G Sponza, M Morgante… - Proceedings of the …, 2007 - National Acad Sciences
Flowering time is a fundamental trait of maize adaptation to different agricultural
environments. Although a large body of information is available on the map position of …

Quantitative trait loci: a meta-analysis

B Goffinet, S Gerber - Genetics, 2000 - academic.oup.com
This article presents a method to combine QTL results from different independent analyses.
This method provides a modified Akaike criterion that can be used to decide how many QTL …

Coincident light and clock regulation of pseudoresponse regulator protein 37 (PRR37) controls photoperiodic flowering in sorghum

RL Murphy, RR Klein, DT Morishige… - Proceedings of the …, 2011 - National Acad Sciences
Optimal flowering time is critical to the success of modern agriculture. Sorghum is a short-
day tropical species that exhibits substantial photoperiod sensitivity and delayed flowering in …

QTL analysis in plants; where are we now?

MJ Kearsey, AGL Farquhar - Heredity, 1998 - nature.com
We have briefly reviewed the methods currently available for QTL analysis in segregating
populations and summarized some of the conclusions arising from such analyses in plant …