Bioengineering of microalgae: recent advances, perspectives, and regulatory challenges for industrial application

G Kumar, A Shekh, S Jakhu, Y Sharma… - … in Bioengineering and …, 2020 - frontiersin.org
Microalgae, due to their complex metabolic capacity, are being continuously explored for
nutraceuticals, pharmaceuticals, and other industrially important bioactives. However …

[PDF][PDF] A simple guide to de novo transcriptome assembly and annotation

V Raghavan, L Kraft, F Mesny… - Briefings in …, 2022 - academic.oup.com
A transcriptome constructed from short-read RNA sequencing (RNA-seq) is an easily
attainable proxy catalog of protein-coding genes when genome assembly is unnecessary …

PLAZA 4.0: an integrative resource for functional, evolutionary and comparative plant genomics

M Van Bel, T Diels, E Vancaester, L Kreft… - Nucleic acids …, 2018 - academic.oup.com
Abstract PLAZA (https://bioinformatics. psb. ugent. be/plaza) is a plant-oriented online
resource for comparative, evolutionary and functional genomics. The PLAZA platform …

PLAZA 3.0: an access point for plant comparative genomics

S Proost, M Van Bel, D Vaneechoutte… - Nucleic acids …, 2015 - academic.oup.com
Comparative sequence analysis has significantly altered our view on the complexity of
genome organization and gene functions in different kingdoms. PLAZA 3.0 is designed to …

Insights into the evolution of multicellularity from the sea lettuce genome

O De Clerck, SM Kao, KA Bogaert, J Blomme… - Current biology, 2018 - cell.com
We report here the 98.5 Mbp haploid genome (12,924 protein coding genes) of Ulva
mutabilis, a ubiquitous and iconic representative of the Ulvophyceae or green seaweeds …

Neoproterozoic origin and multiple transitions to macroscopic growth in green seaweeds

A Del Cortona, CJ Jackson… - Proceedings of the …, 2020 - National Acad Sciences
The Neoproterozoic Era records the transition from a largely bacterial to a predominantly
eukaryotic phototrophic world, creating the foundation for the complex benthic ecosystems …

The Seminavis robusta genome provides insights into the evolutionary adaptations of benthic diatoms

CM Osuna-Cruz, G Bilcke, E Vancaester… - Nature …, 2020 - nature.com
Benthic diatoms are the main primary producers in shallow freshwater and coastal
environments, fulfilling important ecological functions such as nutrient cycling and sediment …

Marine natural products from microalgae: An-omics overview

C Lauritano, MI Ferrante, A Rogato - Marine Drugs, 2019 - mdpi.com
Over the last decade, genome sequences and other-omics datasets have been produced for
a wide range of microalgae, and several others are on the way. Marine microalgae possess …

Population genomics of picophytoplankton unveils novel chromosome hypervariability

R Blanc-Mathieu, M Krasovec, M Hebrard, S Yau… - Science …, 2017 - science.org
Tiny photosynthetic microorganisms that form the picoplankton (between 0.3 and 3 μm in
diameter) are at the base of the food web in many marine ecosystems, and their adaptability …

The transcription factor bZIP14 regulates the TCA cycle in the diatom Phaeodactylum tricornutum

M Matthijs, M Fabris, T Obata, I Foubert… - The EMBO …, 2017 - embopress.org
Diatoms are amongst the most important marine microalgae in terms of biomass, but little is
known concerning the molecular mechanisms that regulate their versatile metabolism. Here …