Microbiome composition and function in aquatic vertebrates: small organisms making big impacts on aquatic animal health

L Sehnal, E Brammer-Robbins… - Frontiers in …, 2021 - frontiersin.org
Aquatic ecosystems are under increasing stress from global anthropogenic and natural
changes, including climate change, eutrophication, ocean acidification, and pollution. In this …

Biosynthetic capacity, metabolic variety and unusual biology in the CPR and DPANN radiations

CJ Castelle, CT Brown, K Anantharaman… - Nature Reviews …, 2018 - nature.com
Candidate phyla radiation (CPR) bacteria and DPANN (an acronym of the names of the first
included phyla) archaea are massive radiations of organisms that are widely distributed …

Genome-resolved metagenomics reveals site-specific diversity of episymbiotic CPR bacteria and DPANN archaea in groundwater ecosystems

C He, R Keren, ML Whittaker, IF Farag, JA Doudna… - Nature …, 2021 - nature.com
Candidate phyla radiation (CPR) bacteria and DPANN archaea are unisolated, small-celled
symbionts that are often detected in groundwater. The effects of groundwater geochemistry …

Correlation and association analyses in microbiome study integrating multiomics in health and disease

Y **a - Progress in molecular biology and translational …, 2020 - Elsevier
Correlation and association analyses are one of the most widely used statistical methods in
research fields, including microbiome and integrative multiomics studies. Correlation and …

Biological stability of drinking water: controlling factors, methods, and challenges

EI Prest, F Hammes, MCM Van Loosdrecht… - Frontiers in …, 2016 - frontiersin.org
Biological stability of drinking water refers to the concept of providing consumers with
drinking water of same microbial quality at the tap as produced at the water treatment facility …

[HTML][HTML] Emerging priorities for microbiome research

CM Cullen, KK Aneja, S Beyhan, CE Cho… - Frontiers in …, 2020 - frontiersin.org
Microbiome research has increased dramatically in recent years, driven by advances in
technology and significant reductions in the cost of analysis. Such research has unlocked a …

Flow cytometric bacterial cell counts challenge conventional heterotrophic plate counts for routine microbiological drinking water monitoring

S Van Nevel, S Koetzsch, CR Proctor, MD Besmer… - Water Research, 2017 - Elsevier
Drinking water utilities and researchers continue to rely on the century-old heterotrophic
plate counts (HPC) method for routine assessment of general microbiological water quality …

Next generation sequencing approaches to evaluate water and wastewater quality

E Garner, BC Davis, E Milligan, MF Blair, I Keenum… - Water Research, 2021 - Elsevier
The emergence of next generation sequencing (NGS) is revolutionizing the potential to
address complex microbiological challenges in the water industry. NGS technologies can …

Combined effects of seasonality and stagnation on tap water quality: Changes in chemical parameters, metabolic activity and co-existence in bacterial community

H Zhang, L Xu, T Huang, M Yan, K Liu, Y Miao… - Journal of Hazardous …, 2021 - Elsevier
In drinking water distribution pipeline systems, the tap water quality is regulated by several
biotic and abiotic factors, which can threaten the health of consumers. Stagnation is …

Drinking water microbiology—from measurement to management

CR Proctor, F Hammes - Current opinion in biotechnology, 2015 - Elsevier
Highlights•Highly diverse drinking water microbiomes comprise up to 40 phyla.•The
microbiome varies across phases (planktonic, biofilms, and loose deposits).•The …