Watching proteins wiggle: Map** structures with two-dimensional infrared spectroscopy

A Ghosh, JS Ostrander, MT Zanni - Chemical reviews, 2017 - ACS Publications
Proteins exhibit structural fluctuations over decades of time scales. From the picosecond
side chain motions to aggregates that form over the course of minutes, characterizing protein …

Coherent two-dimensional optical spectroscopy

M Cho - Chemical reviews, 2008 - ACS Publications
Two-dimensional (2D) optical spectroscopy utilizing multiple ultrafast coherent laser pulses
in the infrared or UV-vis frequency range has been used to study protein structure and …

[ΒΙΒΛΙΟ][B] Two-dimensional optical spectroscopy

M Cho - 2009 - taylorfrancis.com
Two-Dimensional Optical Spectroscopy discusses the principles and applications of newly
emerging two-dimensional vibrational and optical spectroscopy techniques. It provides a …

Infrared probes for studying the structure and dynamics of biomolecules

H Kim, M Cho - Chemical reviews, 2013 - ACS Publications
The first step toward understanding most of the chemical and biological processes in
condensed phases is to accurately describe solute− solvent interaction energy and to …

Infrared and Raman Line Shapes of Dilute HOD in Liquid H2O and D2O from 10 to 90 °C

SA Corcelli, JL Skinner - The Journal of Physical Chemistry A, 2005 - ACS Publications
A combined electronic structure/molecular dynamics approach was used to calculate
infrared and isotropic Raman spectra for the OH or OD stretches of dilute HOD in D2O or …

[ΒΙΒΛΙΟ][B] Ultrafast infrared vibrational spectroscopy

MD Fayer - 2013 - books.google.com
The advent of laser-based sources of ultrafast infrared pulses has extended the study of very
fast molecular dynamics to the observation of processes manifested through their effects on …

Assessing the utility of infrared spectroscopy as a structural diagnostic tool for β-sheets in self-assembling aromatic peptide amphiphiles

S Fleming, PWJM Frederix, I Ramos Sasselli, NT Hunt… - Langmuir, 2013 - ACS Publications
β-Sheets are a commonly found structural motif in self-assembling aromatic peptide
amphiphiles, and their characteristic “amide I” infrared (IR) absorption bands are routinely …

Structural motif of polyglutamine amyloid fibrils discerned with mixed-isotope infrared spectroscopy

LE Buchanan, JK Carr, AM Fluitt, AJ Hoganson… - Proceedings of the …, 2014 - pnas.org
Polyglutamine (polyQ) sequences are found in a variety of proteins, and mutational
expansion of the polyQ tract is associated with many neurodegenerative diseases. We study …

[HTML][HTML] Vibrational approach to the dynamics and structure of protein amyloids

H Li, R Lantz, D Du - Molecules, 2019 - mdpi.com
Amyloid diseases, including neurodegenerative diseases such as Alzheimer's and
Parkinson's, are linked to a poorly understood progression of protein misfolding and …

An Empirical IR Frequency Map for Ester C O Stretching Vibrations

SC Edington, JC Flanagan, CR Baiz - The Journal of Physical …, 2016 - ACS Publications
We present an approach for parametrizing spectroscopic maps of carbonyl groups against
experimental IR absorption spectra. The model correlates electric fields sampled from …