DNA replication stress as a hallmark of cancer

M Macheret, TD Halazonetis - Annual Review of Pathology …, 2015 - annualreviews.org
Human cancers share properties referred to as hallmarks, among which sustained
proliferation, escape from apoptosis, and genomic instability are the most pervasive. The …

Eukaryotic DNA replication origins: many choices for appropriate answers

M Méchali - Nature reviews Molecular cell biology, 2010 - nature.com
At each cell division in humans, 30,000–50,000 DNA replication origins are activated, and it
remains unclear how they are selected and recognized by replication factors. DNA …

DNA Topoisomerase I differentially modulates R-loops across the human genome

SG Manzo, SR Hartono, LA Sanz, J Marinello… - Genome biology, 2018 - Springer
Background Co-transcriptional R-loops are abundant non-B DNA structures in mammalian
genomes. DNA Topoisomerase I (Top1) is often thought to regulate R-loop formation owing …

Evaluating genome-scale approaches to eukaryotic DNA replication

DM Gilbert - Nature reviews Genetics, 2010 - nature.com
Mechanisms regulating where and when eukaryotic DNA replication initiates remain a
mystery. Recently, genome-scale methods have been brought to bear on this problem. The …

The spatiotemporal program of DNA replication is associated with specific combinations of chromatin marks in human cells

F Picard, JC Cadoret, B Audit, A Arneodo, A Alberti… - PLoS …, 2014 - journals.plos.org
The duplication of mammalian genomes is under the control of a spatiotemporal program
that orchestrates the positioning and the timing of firing of replication origins. The molecular …

Multi-scale coding of genomic information: From DNA sequence to genome structure and function

A Arneodo, C Vaillant, B Audit, F Argoul… - Physics Reports, 2011 - Elsevier
Understanding how chromatin is spatially and dynamically organized in the nucleus of
eukaryotic cells and how this affects genome functions is one of the main challenges of cell …

MYC and the control of DNA replication

D Dominguez-Sola, J Gautier - Cold Spring …, 2014 - perspectivesinmedicine.cshlp.org
The MYC oncogene is a multifunctional protein that is aberrantly expressed in a significant
fraction of tumors from diverse tissue origins. Because of its multifunctional nature, it has …

Organization of DNA replication

VO Chagin, JH Stear… - Cold Spring Harbor …, 2010 - cshperspectives.cshlp.org
The discovery of the DNA double helix structure half a century ago immediately suggested a
mechanism for its duplication by semi-conservative copying of the nucleotide sequence into …

Replication-associated mutational asymmetry in the human genome

CL Chen, L Duquenne, B Audit… - Molecular biology …, 2011 - academic.oup.com
During evolution, mutations occur at rates that can differ between the two DNA strands. In
the human genome, nucleotide substitutions occur at different rates on the transcribed and …

Interference between DNA replication and transcription as a cause of genomic instability

YL Lin, P Pasero - Current genomics, 2012 - ingentaconnect.com
Replication and transcription are key aspects of DNA metabolism that take place on the
same template and potentially interfere with each other. Conflicts between these two …