Triple-bond vibrations: Emerging applications in energy and biological sciences
Triple bonds, such as that formed between two carbon atoms (ie, C≡ C) or that formed
between one carbon atom and one nitrogen atom (ie, C≡ N), afford unique chemical …
between one carbon atom and one nitrogen atom (ie, C≡ N), afford unique chemical …
Unnatural Amino Acids for Biological Spectroscopy and Microscopy
Due to advances in methods for site-specific incorporation of unnatural amino acids (UAAs)
into proteins, a large number of UAAs with tailored chemical and/or physical properties have …
into proteins, a large number of UAAs with tailored chemical and/or physical properties have …
Constant pH Simulation with FMM Electrostatics in GROMACS.(A) Design and Applications
The structural dynamics of biological macromolecules, such as proteins, DNA/RNA, or
complexes thereof, are strongly influenced by protonation changes of their typically many …
complexes thereof, are strongly influenced by protonation changes of their typically many …
CO bonding in hexa‐and pentacoordinate carboxy‐neuroglobin: A quantum mechanics/molecular mechanics and local vibrational mode study
M Freindorf, AAA Delgado… - Journal of Computational …, 2022 - Wiley Online Library
We present a comprehensive investigation on the different role of CO in carboxyneuroglobin
(1) as ligand of the heme group in the active site forming a bond with the heme iron and (2) …
(1) as ligand of the heme group in the active site forming a bond with the heme iron and (2) …
Measuring the Electric Fields of Ions Captured in Crown Ethers
A Maitra, WR Lake, A Mohamed… - The Journal of …, 2024 - ACS Publications
Controlling reactivity with electric fields is a persistent challenge in chemistry. One approach
is to tether ions at well-defined locations near a reactive center. To quantify fields arising …
is to tether ions at well-defined locations near a reactive center. To quantify fields arising …
Phenol as a Tethering Group to Gold Surfaces: Stark Response and Comparison to Benzenethiol
Understanding the adsorption of organic molecules on metals is important in numerous
areas of surface science, including electrocatalysis, electrosynthesis, and biosensing. While …
areas of surface science, including electrocatalysis, electrosynthesis, and biosensing. While …
Local electric fields in aqueous electrolytes
Vibrational Stark shifts were explored in aqueous solutions of organic molecules with
carbonyl-and nitrile-containing constituents. In many cases, the vibrational resonances from …
carbonyl-and nitrile-containing constituents. In many cases, the vibrational resonances from …
Assessing the effect of Hofmeister anions on the hydrogen-bonding strength of water via nitrile stretching frequency shift
The temperature dependence of the peak frequency (νmax) of the C≡ N stretching
vibrational spectrum of a hydrogen-bonded C≡ N species is known to be a qualitative …
vibrational spectrum of a hydrogen-bonded C≡ N species is known to be a qualitative …
Electrostatic Impact of Brefeldin A on Thiocyanate Probes Surrounding the Interface of Arf1-BFA-ARNO4M, a Protein–Drug–Protein Complex
FA Jermusek Jr, LJ Webb - Biochemistry, 2023 - ACS Publications
Protein–protein interactions regulate many cellular processes, making them ideal drug
candidates. Design of such drugs, however, is hindered by a lack of understanding of the …
candidates. Design of such drugs, however, is hindered by a lack of understanding of the …
Determining the Electrostatic Contributions of GTPase-GEF Complexes on Interfacial Drug Binding Specificity: A Case Study of a Protein–Drug–Protein Complex
FA Jermusek Jr, LJ Webb - Biochemistry, 2024 - ACS Publications
Understanding the factors that contribute to specificity of protein–protein interactions allows
for design of orthosteric small molecules. Within this environment, a small molecule requires …
for design of orthosteric small molecules. Within this environment, a small molecule requires …