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Single-cell RNA-seq methods to interrogate virus-host interactions
The twenty-first century has seen the emergence of many epidemic and pandemic viruses,
with the most recent being the SARS-CoV-2-driven COVID-19 pandemic. As obligate …
with the most recent being the SARS-CoV-2-driven COVID-19 pandemic. As obligate …
Dissecting human population variation in single-cell responses to SARS-CoV-2
Humans display substantial interindividual clinical variability after SARS-CoV-2 infection,–,
the genetic and immunological basis of which has begun to be deciphered. However, the …
the genetic and immunological basis of which has begun to be deciphered. However, the …
[HTML][HTML] Virus-like particles: Measures and biological functions
Virus-like particles resemble infectious virus particles in size, shape, and molecular
composition; however, they fail to productively infect host cells. Historically, the presence of …
composition; however, they fail to productively infect host cells. Historically, the presence of …
Segment-specific kinetics of mRNA, cRNA, and vRNA accumulation during influenza virus infection
Influenza A virus (IAV) is a segmented negative-sense RNA virus and is the cause of major
epidemics and pandemics. The replication of IAV is complex, involving the production of …
epidemics and pandemics. The replication of IAV is complex, involving the production of …
Structure and dynamics of enterovirus genotype networks
Like all biological populations, viral populations exist as networks of genotypes connected
through mutation. Map** the topology of these networks and quantifying population …
through mutation. Map** the topology of these networks and quantifying population …
Single-cell herpes simplex virus type 1 infection of neurons using drop-based microfluidics reveals heterogeneous replication kinetics
Single-cell analyses of viral infections reveal heterogeneity that is not detected by traditional
population-level studies. This study applies drop-based microfluidics to investigate the …
population-level studies. This study applies drop-based microfluidics to investigate the …
Influenza A viral burst size from thousands of infected single cells using droplet quantitative PCR (dqPCR)
An important aspect of how viruses spread and infect is the viral burst size, or the number of
new viruses produced by each infected cell. Surprisingly, this value remains poorly …
new viruses produced by each infected cell. Surprisingly, this value remains poorly …
Single-cell transcriptomics of the ventral posterolateral nucleus-enriched thalamic regions from HSV-1-infected mice reveal a novel microglia/microglia-like …
Background Microglia participate in the immune response upon central nervous system
(CNS) infections. However, the role of these cells during herpes simplex encephalitis (HSE) …
(CNS) infections. However, the role of these cells during herpes simplex encephalitis (HSE) …
Single-cell and bulk RNA-sequencing reveal differences in monocyte susceptibility to influenza A virus infection between Africans and Europeans
MB O'neill, H Quach, J Pothlichet, Y Aquino… - Frontiers in …, 2021 - frontiersin.org
There is considerable inter-individual and inter-population variability in response to viruses.
The potential of monocytes to elicit type-I interferon responses has attracted attention to their …
The potential of monocytes to elicit type-I interferon responses has attracted attention to their …
Single‐cell transcriptomics reveals immune response of intestinal cell types to viral infection
Human intestinal epithelial cells form a primary barrier protecting us from pathogens, yet
only limited knowledge is available about individual contribution of each cell type to …
only limited knowledge is available about individual contribution of each cell type to …