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The origin of life: RNA and protein co‐evolution on the ancient earth
S Tagami, P Li - Development, Growth & Differentiation, 2023 - Wiley Online Library
How life emerged from simple non‐life chemicals on the ancient Earth is one of the greatest
mysteries in biology. The gene expression system of extant life is based on the …
mysteries in biology. The gene expression system of extant life is based on the …
Origins of life: The Protein Folding Problem all over again?
How did specific useful protein sequences arise from simpler molecules at the origin of life?
This seemingly needle-in-a-haystack problem has remarkably close resemblance to the old …
This seemingly needle-in-a-haystack problem has remarkably close resemblance to the old …
[HTML][HTML] Probing the role of cysteine thiyl radicals in biology: eminently dangerous, difficult to scavenge
B Moosmann, P Hajieva - Antioxidants, 2022 - mdpi.com
Thiyl radicals are exceptionally interesting reactive sulfur species (RSS), but rather rarely
considered in a biological or medical context. We here review the reactivity of protein thiyl …
considered in a biological or medical context. We here review the reactivity of protein thiyl …
The impact of AI‐based modeling on the accuracy of protein assembly prediction: insights from CASP15
In CASP15, 87 predictors submitted around 11 000 models on 41 assembly targets. The
community demonstrated exceptional performance in overall fold and interface contact …
community demonstrated exceptional performance in overall fold and interface contact …
Peptide-RNA coacervates as a cradle for the evolution of folded domains
Peptide-RNA coacervates can result in the concentration and compartmentalization of
simple biopolymers. Given their primordial relevance, peptide-RNA coacervates may have …
simple biopolymers. Given their primordial relevance, peptide-RNA coacervates may have …
An ancestral fold reveals the evolutionary link between RNA polymerase and ribosomal proteins
S Yagi, S Tagami - Nature communications, 2024 - nature.com
Numerous molecular machines are required to drive the central dogma of molecular biology.
However, the means by which these numerous proteins emerged in the early evolutionary …
However, the means by which these numerous proteins emerged in the early evolutionary …
Selective synthesis of lysine peptides and the prebiotically plausible synthesis of catalytically active diaminopropionic acid peptide nitriles in water
Why life encodes specific proteinogenic amino acids remains an unsolved problem, but a
non-enzymatic synthesis that recapitulates biology's universal strategy of stepwise N-to-C …
non-enzymatic synthesis that recapitulates biology's universal strategy of stepwise N-to-C …
Boron-assisted abiotic polypeptide synthesis
Y Sumie, K Sato, T Kakegawa… - Communications Chemistry, 2023 - nature.com
The emergence of proteins and their interactions with RNAs were a key step in the origin
and early evolution of life. The abiotic synthesis of peptides has been limited in short amino …
and early evolution of life. The abiotic synthesis of peptides has been limited in short amino …
Hydrophobic-cationic peptides modulate RNA polymerase ribozyme activity by accretion
Accretion and the resulting increase in local concentration is a widespread mechanism in
biology to enhance biomolecular functions (for example, in liquid-liquid demixing phases) …
biology to enhance biomolecular functions (for example, in liquid-liquid demixing phases) …
Integrated computational characterization of valosin-containing protein double-psi β-barrel domain: Insights into structural stability, binding mechanisms, and …
Valosin-containing protein (VCP) plays a crucial role in various cellular processes, yet the
molecular mechanisms and structural dynamics of its double-psi β-barrel (DPBB) domain …
molecular mechanisms and structural dynamics of its double-psi β-barrel (DPBB) domain …