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[HTML][HTML] A blood atlas of COVID-19 defines hallmarks of disease severity and specificity
DJ Ahern, Z Ai, M Ainsworth, C Allan, A Allcock… - Cell, 2022 - cell.com
Treatment of severe COVID-19 is currently limited by clinical heterogeneity and incomplete
description of specific immune biomarkers. We present here a comprehensive multi-omic …
description of specific immune biomarkers. We present here a comprehensive multi-omic …
Omicron infection following vaccination enhances a broad spectrum of immune responses dependent on infection history
Pronounced immune escape by the SARS-CoV-2 Omicron variant has resulted in many
individuals possessing hybrid immunity, generated through a combination of vaccination …
individuals possessing hybrid immunity, generated through a combination of vaccination …
The immuneML ecosystem for machine learning analysis of adaptive immune receptor repertoires
Adaptive immune receptor repertoires (AIRR) are key targets for biomedical research as
they record past and ongoing adaptive immune responses. The capacity of machine …
they record past and ongoing adaptive immune responses. The capacity of machine …
A spatially resolved single-cell lung atlas integrated with clinical and blood signatures distinguishes COVID-19 disease trajectories
COVID-19 is characterized by a broad range of symptoms and disease trajectories.
Understanding the correlation between clinical biomarkers and lung pathology during acute …
Understanding the correlation between clinical biomarkers and lung pathology during acute …
Robustness and reproducibility for AI learning in biomedical sciences: RENOIR
Artificial intelligence (AI) techniques are increasingly applied across various domains,
favoured by the growing acquisition and public availability of large, complex datasets …
favoured by the growing acquisition and public availability of large, complex datasets …
[HTML][HTML] Systems immunology: revealing influenza immunological imprint
Understanding protective influenza immunity and identifying immune correlates of protection
poses a major challenge and requires an appreciation of the immune system in all of its …
poses a major challenge and requires an appreciation of the immune system in all of its …
Divergent trajectories of antiviral memory after SARS-CoV-2 infection
The trajectories of acquired immunity to severe acute respiratory syndrome coronavirus 2
infection are not fully understood. We present a detailed longitudinal cohort study of UK …
infection are not fully understood. We present a detailed longitudinal cohort study of UK …
ProPythia: A Python package for protein classification based on machine and deep learning
The field of protein data mining has been growing rapidly in the last years. To characterize
proteins and determine their function from their amino acid sequences are challenging and …
proteins and determine their function from their amino acid sequences are challenging and …
Evaluating the immune response in treatment-naive hospitalised patients with influenza and COVID-19
The worldwide COVID-19 pandemic has claimed millions of lives and has had a profound
effect on global life. Understanding the body's immune response to SARS-CoV-2 infection is …
effect on global life. Understanding the body's immune response to SARS-CoV-2 infection is …
Disease trajectories in hospitalized COVID-19 patients are predicted by clinical and peripheral blood signatures representing distinct lung pathologies
Linking clinical biomarkers and lung pathology still is necessary to understand COVID-19
pathogenesis and the basis of progression to lethal outcomes. Resolving these knowledge …
pathogenesis and the basis of progression to lethal outcomes. Resolving these knowledge …