Multiple genome alignment in the telomere-to-telomere assembly era

B Kille, A Balaji, FJ Sedlazeck, M Nute, TJ Treangen - Genome Biology, 2022 - Springer
With the arrival of telomere-to-telomere (T2T) assemblies of the human genome comes the
computational challenge of efficiently and accurately constructing multiple genome …

Detoxifying enzyme complements and host use phenotypes in 160 insect species

RV Rane, AB Ghodke, AA Hoffmann… - Current opinion in insect …, 2019 - Elsevier
Highlights•160 insect genomes screened for esterase, GST and cytochrome P450
genes.•Omnivores and herbivores eating chemically complex tissues have many of these …

Dense sampling of bird diversity increases power of comparative genomics

S Feng, J Stiller, Y Deng, J Armstrong, QI Fang… - Nature, 2020 - nature.com
Whole-genome sequencing projects are increasingly populating the tree of life and
characterizing biodiversity,,–. Sparse taxon sampling has previously been proposed to …

A complete, telomere-to-telomere human genome sequence presents new opportunities for evolutionary genomics

Y Mao, G Zhang - Nature methods, 2022 - nature.com
The release of the first telomere-to-telomere (T2T) human genome sequence marks a
milestone for human genomics research and holds promise of complete genomes for …

Ecological strategies of (pl) ants: Towards a world‐wide worker economic spectrum for ants

H Gibb, TR Bishop, L Leahy, CL Parr… - Functional …, 2023 - Wiley Online Library
Current global challenges call for a rigorously predictive ecology. Our understanding of
ecological strategies, imputed through suites of measurable functional traits, comes from …

Larger colony sizes favoured the evolution of more worker castes in ants

L Bell-Roberts, JFR Turner, GDA Werner… - Nature ecology & …, 2024 - nature.com
The size–complexity hypothesis is a leading explanation for the evolution of complex life on
earth. It predicts that in lineages that have undergone a major transition in organismality …

Relaxed selection underlies genome erosion in socially parasitic ant species

L Schrader, H Pan, M Bollazzi, M Schiøtt… - Nature …, 2021 - nature.com
Inquiline ants are highly specialized and obligate social parasites that infiltrate and exploit
colonies of closely related species. They have evolved many times convergently, are often …

Pathogen-specific social immunity is associated with erosion of individual immune function in an ant

F Masson, RL Brown, J Vizueta, T Irvine… - Nature …, 2024 - nature.com
Contagious diseases are a major threat to societies in which individuals live in close contact.
Social insects have evolved collective defense behaviors, such as social care or isolation of …

Evaluating UCE data adequacy and integrating uncertainty in a comprehensive phylogeny of ants

ML Borowiec, YM Zhang, K Neves… - Systematic …, 2025 - academic.oup.com
While some relationships in phylogenomic studies have remained stable since the Sanger
sequencing era, many challenging nodes remain, even with genome-scale data …

The ants (Hymenoptera: Formicidae) and their parasites: effects of parasitic manipulations and host responses on ant behavioral ecology

C De Bekker, I Will, B Das, RMM Adams - Myrmecological News, 2018 - biotaxa.org
Ants can display modified behaviors that represent the extended phenotypes of genes
expressed by parasites that infect them. In such cases, the modifications benefit the parasite …