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Genome editing with CRISPR–Cas nucleases, base editors, transposases and prime editors
The development of new CRISPR–Cas genome editing tools continues to drive major
advances in the life sciences. Four classes of CRISPR–Cas-derived genome editing agents …
advances in the life sciences. Four classes of CRISPR–Cas-derived genome editing agents …
CRISPR technologies for genome, epigenome and transcriptome editing
Our ability to edit genomes lags behind our capacity to sequence them, but the growing
understanding of CRISPR biology and its application to genome, epigenome and …
understanding of CRISPR biology and its application to genome, epigenome and …
Programmable base editing of A• T to G• C in genomic DNA without DNA cleavage
The spontaneous deamination of cytosine is a major source of transitions from C• G to T• A
base pairs, which account for half of known pathogenic point mutations in humans. The …
base pairs, which account for half of known pathogenic point mutations in humans. The …
Base editing: precision chemistry on the genome and transcriptome of living cells
RNA-guided programmable nucleases from CRISPR systems generate precise breaks in
DNA or RNA at specified positions. In cells, this activity can lead to changes in DNA …
DNA or RNA at specified positions. In cells, this activity can lead to changes in DNA …
Adenine transversion editors enable precise, efficient A• T-to-C• G base editing in mammalian cells and embryos
L Chen, M Hong, C Luan, H Gao, G Ru, X Guo… - Nature …, 2024 - nature.com
Base editors have substantial promise in basic research and as therapeutic agents for the
correction of pathogenic mutations. The development of adenine transversion editors has …
correction of pathogenic mutations. The development of adenine transversion editors has …
Base excision repair
HE Krokan, M Bjørås - Cold Spring Harbor perspectives …, 2013 - cshperspectives.cshlp.org
Base excision repair (BER) corrects DNA damage from oxidation, deamination and
alkylation. Such base lesions cause little distortion to the DNA helix structure. BER is …
alkylation. Such base lesions cause little distortion to the DNA helix structure. BER is …
Determinants of base editing outcomes from target library analysis and machine learning
Although base editors are widely used to install targeted point mutations, the factors that
determine base editing outcomes are not well understood. We characterized sequence …
determine base editing outcomes are not well understood. We characterized sequence …
Breakage of cytoplasmic chromosomes by pathological DNA base excision repair
Chromothripsis is a catastrophic mutational process that promotes tumorigenesis and
causes congenital disease,,–. Chromothripsis originates from aberrations of nuclei called …
causes congenital disease,,–. Chromothripsis originates from aberrations of nuclei called …
Protein tolerance to random amino acid change
Mutagenesis of protein-encoding sequences occurs ubiquitously; it enables evolution,
accumulates during aging, and is associated with disease. Many biotechnological methods …
accumulates during aging, and is associated with disease. Many biotechnological methods …
Alkylation damage in DNA and RNA—repair mechanisms and medical significance
F Drabløs, E Feyzi, PA Aas, CB Vaagbø, B Kavli… - DNA repair, 2004 - Elsevier
Alkylation lesions in DNA and RNA result from endogenous compounds, environmental
agents and alkylating drugs. Simple methylating agents, eg methylnitrosourea, tobacco …
agents and alkylating drugs. Simple methylating agents, eg methylnitrosourea, tobacco …